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SRM spermidine synthase [ Ficedula albicollis (Collared flycatcher) ]

Gene ID: 101821481, updated on 8-Mar-2024

Summary

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Gene symbol
SRM
Gene description
spermidine synthase
See related
Ensembl:ENSFALG00000010293
Gene type
protein coding
RefSeq status
MODEL
Organism
Ficedula albicollis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Muscicapidae; Ficedula
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 21
Exon count:
8
Annotation release Status Assembly Chr Location
101 current FicAlb1.5 (GCF_000247815.1) 21 NC_021692.1 (2202862..2208745, complement)

Chromosome 21 - NC_021692.1Genomic Context describing neighboring genes Neighboring gene peptidylprolyl isomerase H Neighboring gene homeodomain interacting protein kinase 4 Neighboring gene exosome component 10 Neighboring gene mechanistic target of rapamycin kinase Neighboring gene angiopoietin like 7

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_021692.1 Chromosome 21 Reference FicAlb1.5 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables spermidine synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in spermidine biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
spermidine synthase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ficedula albicollis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference FicAlb1.5 Primary Assembly

Genomic

  1. NC_021692.1 Reference FicAlb1.5 Primary Assembly

    Range
    2202862..2208745 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005057730.2 → XP_005057787.1  spermidine synthase

    See identical proteins and their annotated locations for XP_005057787.1

    UniProtKB/TrEMBL
    U3K6S8
    Related
    ENSFALP00000010732.1, ENSFALT00000010775.2
    Conserved Domains (1) summary
    PLN02366
    Location:2 → 292
    PLN02366; spermidine synthase
Nucleotide Protein
Heading Accession and Version

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