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CLUAP1 clusterin associated protein 1 [ Ficedula albicollis (Collared flycatcher) ]

Gene ID: 101819831, updated on 8-Mar-2024

Summary

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Gene symbol
CLUAP1
Gene description
clusterin associated protein 1
See related
Ensembl:ENSFALG00000004391
Gene type
protein coding
RefSeq status
MODEL
Organism
Ficedula albicollis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Muscicapidae; Ficedula
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 14
Exon count:
13
Annotation release Status Assembly Chr Location
101 current FicAlb1.5 (GCF_000247815.1) 14 NC_021686.1 (2117738..2188053)

Chromosome 14 - NC_021686.1Genomic Context describing neighboring genes Neighboring gene ankyrin repeat and sterile alpha motif domain containing 3 Neighboring gene glucagon receptor-like Neighboring gene uncharacterized LOC101811012 Neighboring gene NLR family CARD domain containing 3 Neighboring gene NmrA like redox sensor 1 Neighboring gene DnaJ heat shock protein family (Hsp40) member A3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_021686.1 Chromosome 14 Reference FicAlb1.5 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cilium assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in centrosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cilium IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of intraciliary transport particle B IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
clusterin-associated protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ficedula albicollis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference FicAlb1.5 Primary Assembly

Genomic

  1. NC_021686.1 Reference FicAlb1.5 Primary Assembly

    Range
    2117738..2188053
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016302035.1 → XP_016157521.1  clusterin-associated protein 1 isoform X2

    UniProtKB/TrEMBL
    U3JP63

  2. XM_005054178.1 → XP_005054235.1  clusterin-associated protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A803W514, U3JP63
    Related
    ENSFALP00000030070.1, ENSFALT00000027480.1
    Conserved Domains (2) summary
    pfam03836
    Location:200 → 265
    RasGAP_C; RasGAP C-terminus
    pfam10234
    Location:19 → 279
    Cluap1; Clusterin-associated protein-1
Nucleotide Protein
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