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GABRD gamma-aminobutyric acid type A receptor subunit delta [ Ficedula albicollis (Collared flycatcher) ]

Gene ID: 101816276, updated on 8-Mar-2024

Summary

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Gene symbol
GABRD
Gene description
gamma-aminobutyric acid type A receptor subunit delta
See related
Ensembl:ENSFALG00000009470
Gene type
protein coding
RefSeq status
MODEL
Organism
Ficedula albicollis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Muscicapidae; Ficedula
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 21
Exon count:
9
Annotation release Status Assembly Chr Location
101 current FicAlb1.5 (GCF_000247815.1) 21 NC_021692.1 (5412784..5426438, complement)

Chromosome 21 - NC_021692.1Genomic Context describing neighboring genes Neighboring gene FA core complex associated protein 20 Neighboring gene protein kinase C zeta Neighboring gene cilia and flagella associated protein 74 Neighboring gene transmembrane protein 52

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_021692.1 Chromosome 21 Reference FicAlb1.5 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GABA-A receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables extracellular ligand-gated monoatomic ion channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables neurotransmitter receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chemical synaptic transmission IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in monoatomic ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nervous system process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of membrane potential IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of GABA-A receptor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in neuron projection IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in synapse IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
gamma-aminobutyric acid receptor subunit delta
Names
gamma-aminobutyric acid (GABA) A receptor, delta
gamma-aminobutyric acid type A receptor delta subunit

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ficedula albicollis Annotation Release 101

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference FicAlb1.5 Primary Assembly

Genomic

  1. NC_021692.1 Reference FicAlb1.5 Primary Assembly

    Range
    5412784..5426438 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005057601.2 → XP_005057658.1  gamma-aminobutyric acid receptor subunit delta isoform X2

    UniProtKB/TrEMBL
    A0A803VQU8
    Conserved Domains (3) summary
    TIGR00860
    Location:44 → 448
    LIC; Cation transporter family protein
    pfam02931
    Location:44 → 245
    Neur_chan_LBD; Neurotransmitter-gated ion-channel ligand binding domain
    pfam02932
    Location:254 → 363
    Neur_chan_memb; Neurotransmitter-gated ion-channel transmembrane region

  2. XM_005057600.2 → XP_005057657.1  gamma-aminobutyric acid receptor subunit delta isoform X1

    UniProtKB/TrEMBL
    A0A803VQU8, U3K4B8
    Related
    ENSFALP00000009872.1, ENSFALT00000009912.2
    Conserved Domains (3) summary
    TIGR00860
    Location:44 → 449
    LIC; Cation transporter family protein
    pfam02931
    Location:44 → 246
    Neur_chan_LBD; Neurotransmitter-gated ion-channel ligand binding domain
    pfam02932
    Location:255 → 364
    Neur_chan_memb; Neurotransmitter-gated ion-channel transmembrane region
Nucleotide Protein
Heading Accession and Version

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