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NUP155 nucleoporin 155 [ Ficedula albicollis (Collared flycatcher) ]

Gene ID: 101814441, updated on 8-Mar-2024

Summary

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Gene symbol
NUP155
Gene description
nucleoporin 155
See related
Ensembl:ENSFALG00000002048
Gene type
protein coding
RefSeq status
MODEL
Organism
Ficedula albicollis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Muscicapidae; Ficedula
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Z
Exon count:
36
Annotation release Status Assembly Chr Location
101 current FicAlb1.5 (GCF_000247815.1) Z NC_021700.1 (12068075..12096506, complement)

Chromosome Z - NC_021700.1Genomic Context describing neighboring genes Neighboring gene NIPBL cohesin loading factor Neighboring gene ciliogenesis and planar polarity effector complex subunit 1 Neighboring gene WD repeat domain 70 Neighboring gene glial cell derived neurotrophic factor

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_021700.1 Chromosome Z Reference FicAlb1.5 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural constituent of nuclear pore IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in RNA export from nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein import into nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein localization to nuclear inner membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of nuclear pore IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of nuclear pore inner ring IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
nuclear pore complex protein Nup155

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ficedula albicollis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference FicAlb1.5 Primary Assembly

Genomic

  1. NC_021700.1 Reference FicAlb1.5 Primary Assembly

    Range
    12068075..12096506 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005060502.2 → XP_005060559.1  nuclear pore complex protein Nup155 isoform X1

    UniProtKB/TrEMBL
    U3JH77
    Related
    ENSFALP00000002131.1, ENSFALT00000002143.2
    Conserved Domains (2) summary
    pfam03177
    Location:849 → 1174
    Nucleoporin_C; Non-repetitive/WGA-negative nucleoporin C-terminal
    pfam08801
    Location:70 → 500
    Nucleoporin_N; Nup133 N terminal like

  2. XM_005060503.2 → XP_005060560.1  nuclear pore complex protein Nup155 isoform X2

    UniProtKB/TrEMBL
    A0A803VEN7
    Related
    ENSFALP00000021193.1, ENSFALT00000027510.1
    Conserved Domains (2) summary
    pfam03177
    Location:829 → 1154
    Nucleoporin_C; Non-repetitive/WGA-negative nucleoporin C-terminal
    pfam08801
    Location:70 → 500
    Nucleoporin_N; Nup133 N terminal like
Nucleotide Protein
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