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LSP1 lymphocyte specific protein 1 [ Ficedula albicollis (Collared flycatcher) ]

Gene ID: 101813231, updated on 8-Mar-2024

Summary

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Gene symbol
LSP1
Gene description
lymphocyte specific protein 1
See related
Ensembl:ENSFALG00000011655
Gene type
protein coding
RefSeq status
MODEL
Organism
Ficedula albicollis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Muscicapidae; Ficedula
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 5
Exon count:
13
Annotation release Status Assembly Chr Location
101 current FicAlb1.5 (GCF_000247815.1) 5 NC_021677.1 (16116024..16168077, complement)

Chromosome 5 - NC_021677.1Genomic Context describing neighboring genes Neighboring gene mitochondrial ribosomal protein L23 Neighboring gene troponin T3, fast skeletal type Neighboring gene troponin I2, fast skeletal type Neighboring gene synaptotagmin 8

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_021677.1 Chromosome 5 Reference FicAlb1.5 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables actin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lymphocyte-specific protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ficedula albicollis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference FicAlb1.5 Primary Assembly

Genomic

  1. NC_021677.1 Reference FicAlb1.5 Primary Assembly

    Range
    16116024..16168077 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005046812.2 → XP_005046869.1  lymphocyte-specific protein 1 isoform X1

    See identical proteins and their annotated locations for XP_005046869.1

    UniProtKB/TrEMBL
    A0A803W9X5
    Conserved Domains (1) summary
    pfam02029
    Location:86 → 299
    Caldesmon; Caldesmon

  2. XM_005046811.2 → XP_005046868.1  lymphocyte-specific protein 1 isoform X2

    See identical proteins and their annotated locations for XP_005046868.1

    UniProtKB/TrEMBL
    A0A803W9X5
    Related
    ENSFALP00000031781.1, ENSFALT00000045377.1
    Conserved Domains (1) summary
    pfam02029
    Location:86 → 299
    Caldesmon; Caldesmon

  3. XM_005046810.2 → XP_005046867.2  lymphocyte-specific protein 1 isoform X3

    UniProtKB/TrEMBL
    U3KAW8
    Related
    ENSFALP00000012172.2, ENSFALT00000012222.2
Nucleotide Protein
Heading Accession and Version

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