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AHI1 Abelson helper integration site 1 [ Ficedula albicollis (Collared flycatcher) ]

Gene ID: 101812691, updated on 8-Mar-2024

Summary

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Gene symbol
AHI1
Gene description
Abelson helper integration site 1
See related
Ensembl:ENSFALG00000011949
Gene type
protein coding
RefSeq status
MODEL
Organism
Ficedula albicollis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Muscicapidae; Ficedula
Orthologs
human mouse all
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Genomic context

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See AHI1 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
25
Annotation release Status Assembly Chr Location
101 current FicAlb1.5 (GCF_000247815.1) 3 NC_021674.1 (58106788..58196380)

Chromosome 3 - NC_021674.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 22 member 3 Neighboring gene plasminogen-like Neighboring gene MYB proto-oncogene, transcription factor Neighboring gene HBS1 like translational GTPase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_021674.1 Chromosome 3 Reference FicAlb1.5 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in motile cilium assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in ciliary basal body IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
jouberin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ficedula albicollis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference FicAlb1.5 Primary Assembly

Genomic

  1. NC_021674.1 Reference FicAlb1.5 Primary Assembly

    Range
    58106788..58196380
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005043611.2 → XP_005043668.1  jouberin

    UniProtKB/TrEMBL
    A0A803VKB6, U3KBT0
    Related
    ENSFALP00000012484.2, ENSFALT00000012534.2
    Conserved Domains (4) summary
    cd11812
    Location:1046 → 1097
    SH3_AHI-1; Src Homology 3 domain of Abelson helper integration site-1 (AHI-1)
    COG2319
    Location:574 → 897
    WD40; WD40 repeat [General function prediction only]
    cd00200
    Location:578 → 878
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:589 → 629
    7WD40; WD40 repeat [structural motif]
Nucleotide Protein
Heading Accession and Version

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