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PVALB parvalbumin [ Ficedula albicollis (Collared flycatcher) ]

Gene ID: 101812488, updated on 8-Mar-2024

Summary

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Gene symbol
PVALB
Gene description
parvalbumin
See related
Ensembl:ENSFALG00000023210
Gene type
protein coding
RefSeq status
MODEL
Organism
Ficedula albicollis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Muscicapidae; Ficedula
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1A
Exon count:
6
Annotation release Status Assembly Chr Location
101 current FicAlb1.5 (GCF_000247815.1) 1A NC_021672.1 (52417863..52427982)

Chromosome 1A - NC_021672.1Genomic Context describing neighboring genes Neighboring gene colony stimulating factor 2 receptor subunit beta Neighboring gene neutrophil cytosolic factor 4 Neighboring gene intraflagellar transport 27 Neighboring gene calcium voltage-gated channel auxiliary subunit gamma 2 Neighboring gene uncharacterized LOC107604588

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_021672.1 Chromosome 1A Reference FicAlb1.5 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
parvalbumin alpha

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ficedula albicollis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference FicAlb1.5 Primary Assembly

Genomic

  1. NC_021672.1 Reference FicAlb1.5 Primary Assembly

    Range
    52417863..52427982
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005039806.2 → XP_005039863.1  parvalbumin alpha

    See identical proteins and their annotated locations for XP_005039863.1

    UniProtKB/TrEMBL
    A0A803W413
    Conserved Domains (2) summary
    cd00051
    Location:43 → 108
    EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...
    pfam13499
    Location:44 → 107
    EF-hand_7; EF-hand domain pair

  2. XM_005039804.2 → XP_005039861.1  parvalbumin alpha

    See identical proteins and their annotated locations for XP_005039861.1

    UniProtKB/TrEMBL
    A0A803W413
    Conserved Domains (2) summary
    cd00051
    Location:43 → 108
    EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...
    pfam13499
    Location:44 → 107
    EF-hand_7; EF-hand domain pair

  3. XM_005039805.2 → XP_005039862.1  parvalbumin alpha

    See identical proteins and their annotated locations for XP_005039862.1

    UniProtKB/TrEMBL
    A0A803W413
    Related
    ENSFALP00000029719.1, ENSFALT00000044418.1
    Conserved Domains (2) summary
    cd00051
    Location:43 → 108
    EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...
    pfam13499
    Location:44 → 107
    EF-hand_7; EF-hand domain pair
Nucleotide Protein
Heading Accession and Version

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