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CSGALNACT1 chondroitin sulfate N-acetylgalactosaminyltransferase 1 [ Ficedula albicollis (Collared flycatcher) ]

Gene ID: 101812240, updated on 8-Mar-2024

Summary

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Gene symbol
CSGALNACT1
Gene description
chondroitin sulfate N-acetylgalactosaminyltransferase 1
See related
Ensembl:ENSFALG00000006555
Gene type
protein coding
RefSeq status
MODEL
Organism
Ficedula albicollis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Muscicapidae; Ficedula
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 4
Exon count:
11
Annotation release Status Assembly Chr Location
101 current FicAlb1.5 (GCF_000247815.1) 4 NC_021675.1 (26401075..26443316)

Chromosome 4 - NC_021675.1Genomic Context describing neighboring genes Neighboring gene heparan-alpha-glucosaminide N-acetyltransferase Neighboring gene integrator complex subunit 10 Neighboring gene SH2 domain containing 4A Neighboring gene sulfotransferase 1 family member D1-like Neighboring gene adaptor related protein complex 5 subunit sigma 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_021675.1 Chromosome 4 Reference FicAlb1.5 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chondroitin sulfate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi cisterna membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
chondroitin sulfate N-acetylgalactosaminyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ficedula albicollis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference FicAlb1.5 Primary Assembly

Genomic

  1. NC_021675.1 Reference FicAlb1.5 Primary Assembly

    Range
    26401075..26443316
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016297927.1 → XP_016153413.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1

    UniProtKB/TrEMBL
    U3JVN4
    Related
    ENSFALP00000006838.2, ENSFALT00000006867.2
    Conserved Domains (2) summary
    pfam07200
    Location:57 → 131
    Mod_r; Modifier of rudimentary (Mod(r)) protein
    cl11394
    Location:150 → 507
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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