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KLF9 KLF transcription factor 9 [ Ficedula albicollis (Collared flycatcher) ]

Gene ID: 101808305, updated on 8-Mar-2024

Summary

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Gene symbol
KLF9
Gene description
KLF transcription factor 9
Gene type
protein coding
RefSeq status
MODEL
Organism
Ficedula albicollis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Muscicapidae; Ficedula
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Z
Exon count:
3
Annotation release Status Assembly Chr Location
101 current FicAlb1.5 (GCF_000247815.1) Z NC_021700.1 (50798616..50816920, complement)

Chromosome Z - NC_021700.1Genomic Context describing neighboring genes Neighboring gene MAM domain containing 2 Neighboring gene structural maintenance of chromosomes 5 Neighboring gene transient receptor potential cation channel subfamily M member 3 Neighboring gene transmembrane protein 2-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_021700.1 Chromosome Z Reference FicAlb1.5 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Krueppel-like factor 9
Names
Kruppel like factor 9

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ficedula albicollis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference FicAlb1.5 Primary Assembly

Genomic

  1. NC_021700.1 Reference FicAlb1.5 Primary Assembly

    Range
    50798616..50816920 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005061172.1 → XP_005061229.1  Krueppel-like factor 9

    Conserved Domains (4) summary
    COG5048
    Location:122 → 174
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:123 → 145
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:151 → 173
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:137 → 160
    zf-H2C2_2; Zinc-finger double domain
Nucleotide Protein
Heading Accession and Version

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