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BTBD3 BTB domain containing 3 [ Ficedula albicollis (Collared flycatcher) ]

Gene ID: 101806473, updated on 8-Mar-2024

Summary

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Gene symbol
BTBD3
Gene description
BTB domain containing 3
See related
Ensembl:ENSFALG00000010947
Gene type
protein coding
RefSeq status
MODEL
Organism
Ficedula albicollis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Muscicapidae; Ficedula
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 3
Exon count:
6
Annotation release Status Assembly Chr Location
101 current FicAlb1.5 (GCF_000247815.1) 3 NC_021674.1 (5334666..5354972)

Chromosome 3 - NC_021674.1Genomic Context describing neighboring genes Neighboring gene SLX4 interacting protein Neighboring gene jagged canonical Notch ligand 1 Neighboring gene serine palmitoyltransferase long chain base subunit 3 Neighboring gene isthmin 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_021674.1 Chromosome 3 Reference FicAlb1.5 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cerebral cortex development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in dendrite morphogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in neurogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
BTB/POZ domain-containing protein 3
Names
BTB (POZ) domain containing 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ficedula albicollis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference FicAlb1.5 Primary Assembly

Genomic

  1. NC_021674.1 Reference FicAlb1.5 Primary Assembly

    Range
    5334666..5354972
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005042739.2 → XP_005042796.1  BTB/POZ domain-containing protein 3 isoform X2

    See identical proteins and their annotated locations for XP_005042796.1

    UniProtKB/TrEMBL
    U3K8S2
    Conserved Domains (3) summary
    cd18348
    Location:38 → 168
    BTB_POZ_BTBD3; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in BTB/POZ domain-containing protein 3 (BTBD3)
    cd18524
    Location:159 → 253
    BACK_BTBD3; BACK (BTB and C-terminal Kelch) domain found in BTB/POZ domain-containing protein 3 (BTBD3)
    pfam08005
    Location:315 → 460
    PHR; PHR domain

  2. XM_005042740.2 → XP_005042797.1  BTB/POZ domain-containing protein 3 isoform X2

    See identical proteins and their annotated locations for XP_005042797.1

    UniProtKB/TrEMBL
    U3K8S2
    Conserved Domains (3) summary
    cd18348
    Location:38 → 168
    BTB_POZ_BTBD3; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in BTB/POZ domain-containing protein 3 (BTBD3)
    cd18524
    Location:159 → 253
    BACK_BTBD3; BACK (BTB and C-terminal Kelch) domain found in BTB/POZ domain-containing protein 3 (BTBD3)
    pfam08005
    Location:315 → 460
    PHR; PHR domain

  3. XM_005042738.2 → XP_005042795.1  BTB/POZ domain-containing protein 3 isoform X2

    See identical proteins and their annotated locations for XP_005042795.1

    UniProtKB/TrEMBL
    U3K8S2
    Conserved Domains (3) summary
    cd18348
    Location:38 → 168
    BTB_POZ_BTBD3; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in BTB/POZ domain-containing protein 3 (BTBD3)
    cd18524
    Location:159 → 253
    BACK_BTBD3; BACK (BTB and C-terminal Kelch) domain found in BTB/POZ domain-containing protein 3 (BTBD3)
    pfam08005
    Location:315 → 460
    PHR; PHR domain

  4. XM_005042737.1 → XP_005042794.1  BTB/POZ domain-containing protein 3 isoform X1

    See identical proteins and their annotated locations for XP_005042794.1

    UniProtKB/TrEMBL
    U3K8S2
    Related
    ENSFALP00000011426.2, ENSFALT00000011471.2
    Conserved Domains (3) summary
    cd18348
    Location:98 → 228
    BTB_POZ_BTBD3; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in BTB/POZ domain-containing protein 3 (BTBD3)
    cd18524
    Location:219 → 313
    BACK_BTBD3; BACK (BTB and C-terminal Kelch) domain found in BTB/POZ domain-containing protein 3 (BTBD3)
    pfam08005
    Location:375 → 520
    PHR; PHR domain

RNA

  1. XR_218570.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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