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MICAL3 microtubule associated monooxygenase, calponin and LIM domain containing 3 [ Anas platyrhynchos (mallard) ]

Gene ID: 101805047, updated on 8-Mar-2024

Summary

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Gene symbol
MICAL3
Gene description
microtubule associated monooxygenase, calponin and LIM domain containing 3
See related
EnsemblRapid:ENSAPLG00030012897
Gene type
protein coding
RefSeq status
MODEL
Organism
Anas platyrhynchos
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anatinae; Anas
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
49
Annotation release Status Assembly Chr Location
104 current ZJU1.0 (GCF_015476345.1) 1 NC_051772.1 (65101988..65277872, complement)
103 previous assembly IASCAAS_PekingDuck_PBH1.5 (GCF_003850225.1) 1 NC_040046.1 (138073023..138249953)

Chromosome 1 - NC_051772.1Genomic Context describing neighboring genes Neighboring gene BCL2 like 13 Neighboring gene BH3 interacting domain death agonist Neighboring gene uncharacterized LOC106017355 Neighboring gene tubulin alpha-2 chain Neighboring gene uncharacterized LOC119717891 Neighboring gene peroxisomal biogenesis factor 26

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables FAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
F-actin-monooxygenase MICAL3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Anas platyrhynchos Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ZJU1.0 Primary Assembly

Genomic

  1. NC_051772.1 Reference ZJU1.0 Primary Assembly

    Range
    65101988..65277872 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038186631.1 → XP_038042559.1  F-actin-monooxygenase MICAL3 isoform X2

    UniProtKB/TrEMBL
    A0A493TMB7
    Related
    ENSAPLP00030023199.1, ENSAPLT00030034181.1
    Conserved Domains (5) summary
    cd09439
    Location:951 → 1005
    LIM_Mical; The LIM domain of Mical (molecule interacting with CasL)
    PHA03247
    Location:1368 → 1625
    PHA03247; large tegument protein UL36; Provisional
    pfam01494
    Location:87 → 274
    FAD_binding_3; FAD binding domain
    pfam12130
    Location:2116 → 2262
    DUF3585; Protein of unknown function (DUF3585)
    cd21251
    Location:514 → 624
    CH_MICAL3; calponin homology (CH) domain found in molecule interacting with CasL protein 3

  2. XM_038186620.1 → XP_038042548.1  F-actin-monooxygenase MICAL3 isoform X1

    Conserved Domains (3) summary
    cd09439
    Location:951 → 1005
    LIM_Mical; The LIM domain of Mical (molecule interacting with CasL)
    pfam01494
    Location:87 → 274
    FAD_binding_3; FAD binding domain
    cd21251
    Location:514 → 624
    CH_MICAL3; calponin homology (CH) domain found in molecule interacting with CasL protein 3

RNA

  1. XR_005269399.1 RNA Sequence

  2. XR_005269393.1 RNA Sequence

  3. XR_005269396.1 RNA Sequence

  4. XR_005269408.1 RNA Sequence

  5. XR_005269404.1 RNA Sequence

  6. XR_005269390.1 RNA Sequence

  7. XR_005269412.1 RNA Sequence

  8. XR_005269410.1 RNA Sequence

  9. XR_005269401.1 RNA Sequence

  10. XR_005269392.1 RNA Sequence

  11. XR_005269400.1 RNA Sequence

  12. XR_005269398.1 RNA Sequence

  13. XR_005269403.1 RNA Sequence

  14. XR_005269402.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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