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SHTN1 shootin 1 [ Anas platyrhynchos (mallard) ]

Gene ID: 101802310, updated on 8-Mar-2024

Summary

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Gene symbol
SHTN1
Gene description
shootin 1
Locus tag
Anapl_11530
See related
EnsemblRapid:ENSAPLG00030005610
Gene type
protein coding
RefSeq status
MODEL
Organism
Anas platyrhynchos
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anatinae; Anas
Also known as
Shootin-1
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 6
Exon count:
18
Annotation release Status Assembly Chr Location
104 current ZJU1.0 (GCF_015476345.1) 6 NC_051777.1 (30432781..30492447, complement)
103 previous assembly IASCAAS_PekingDuck_PBH1.5 (GCF_003850225.1) 6 NC_040051.1 (7302398..7361644)

Chromosome 6 - NC_051777.1Genomic Context describing neighboring genes Neighboring gene heat shock protein family A (Hsp70) member 12A Neighboring gene uncharacterized LOC106017838 Neighboring gene enolase 4 Neighboring gene uncharacterized LOC113843978 Neighboring gene ventral anterior homeobox 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • KIAA1598

General protein information

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Preferred Names
shootin-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Anas platyrhynchos Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ZJU1.0 Primary Assembly

Genomic

  1. NC_051777.1 Reference ZJU1.0 Primary Assembly

    Range
    30432781..30492447 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027460307.2 → XP_027316108.2  shootin-1 isoform X1

    UniProtKB/TrEMBL
    A0A493TKR8, A0A8B9SM12
    Related
    ENSAPLP00030011765.1, ENSAPLT00030015477.1
    Conserved Domains (3) summary
    PRK10807
    Location:410 → 481
    PRK10807; intermembrane transport protein PqiB
    COG1196
    Location:7 → 333
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    NF033647
    Location:463 → 626
    adhesin_LEA; LEA family epithelial adhesin N-terminal domain

  2. XM_021274112.3 → XP_021129787.3  shootin-1 isoform X2

    UniProtKB/TrEMBL
    R0LGX2
    Related
    ENSAPLP00030011380.1, ENSAPLT00030014947.1
    Conserved Domains (3) summary
    PRK10807
    Location:350 → 421
    PRK10807; intermembrane transport protein PqiB
    COG1196
    Location:81 → 290
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    NF033647
    Location:403 → 566
    adhesin_LEA; LEA family epithelial adhesin N-terminal domain
Nucleotide Protein
Heading Accession and Version

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