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DDX55 DEAD-box helicase 55 [ Anas platyrhynchos (mallard) ]

Gene ID: 101800427, updated on 8-Mar-2024

Summary

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Gene symbol
DDX55
Gene description
DEAD-box helicase 55
Locus tag
Anapl_01793
See related
EnsemblRapid:ENSAPLG00030013365
Gene type
protein coding
RefSeq status
MODEL
Organism
Anas platyrhynchos
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anatinae; Anas
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 16
Exon count:
14
Annotation release Status Assembly Chr Location
104 current ZJU1.0 (GCF_015476345.1) 16 NC_051787.1 (3701045..3707738)
103 previous assembly IASCAAS_PekingDuck_PBH1.5 (GCF_003850225.1) 16 NC_040061.1 (11538203..11544848, complement)

Chromosome 16 - NC_051787.1Genomic Context describing neighboring genes Neighboring gene Rab interacting lysosomal protein like 1 Neighboring gene transmembrane p24 trafficking protein 2 Neighboring gene eukaryotic translation initiation factor 2B subunit alpha Neighboring gene general transcription factor IIH subunit 3 Neighboring gene tectonic family member 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ATP-dependent RNA helicase DDX55

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Anas platyrhynchos Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ZJU1.0 Primary Assembly

Genomic

  1. NC_051787.1 Reference ZJU1.0 Primary Assembly

    Range
    3701045..3707738
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027469772.2 → XP_027325573.2  ATP-dependent RNA helicase DDX55

    UniProtKB/TrEMBL
    U3J618
    Related
    ENSAPLP00030023516.1, ENSAPLT00030034652.1
    Conserved Domains (3) summary
    cd18787
    Location:242 → 372
    SF2_C_DEAD; C-terminal helicase domain of the DEAD box helicases
    cd17960
    Location:20 → 224
    DEADc_DDX55; DEAD-box helicase domain of DEAD box protein 55
    pfam13959
    Location:405 → 462
    DUF4217; Domain of unknown function (DUF4217)
Nucleotide Protein
Heading Accession and Version

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