U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SRSF6 serine and arginine rich splicing factor 6 [ Anas platyrhynchos (mallard) ]

Gene ID: 101799354, updated on 8-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
SRSF6
Gene description
serine and arginine rich splicing factor 6
Locus tag
Anapl_11018
See related
EnsemblRapid:ENSAPLG00030021207
Gene type
protein coding
RefSeq status
MODEL
Organism
Anas platyrhynchos
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anatinae; Anas
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 21
Exon count:
6
Annotation release Status Assembly Chr Location
104 current ZJU1.0 (GCF_015476345.1) 21 NC_051792.1 (307192..312164, complement)
103 previous assembly IASCAAS_PekingDuck_PBH1.5 (GCF_003850225.1) 21 NC_040066.1 (201404..206375, complement)

Chromosome 21 - NC_051792.1Genomic Context describing neighboring genes Neighboring gene microtubule associated protein 1 light chain 3 alpha Neighboring gene uncharacterized LOC110351747 Neighboring gene L3MBTL histone methyl-lysine binding protein 1 Neighboring gene ubiquitin conjugating enzyme E2 V1 Neighboring gene uncharacterized LOC119713345

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in alternative mRNA splicing, via spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mRNA splice site recognition IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of ribonucleoprotein complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
serine/arginine-rich splicing factor 6
Names
Splicing factor, arginine/serine-rich 6

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Anas platyrhynchos Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ZJU1.0 Primary Assembly

Genomic

  1. NC_051792.1 Reference ZJU1.0 Primary Assembly

    Range
    307192..312164 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027473037.2 → XP_027328838.1  serine/arginine-rich splicing factor 6

    UniProtKB/TrEMBL
    A0A8B9T4U8, U3J491
    Related
    ENSAPLP00030035536.1, ENSAPLT00030055312.1
    Conserved Domains (2) summary
    cd12596
    Location:1 → 72
    RRM1_SRSF6; RNA recognition motif 1 (RRM1) found in vertebrate serine/arginine-rich splicing factor 6 (SRSF6)
    cd12600
    Location:111 → 182
    RRM2_SRSF4_like; RNA recognition motif 2 (RRM2) found in serine/arginine-rich splicing factor 4 (SRSF4) and similar proteins
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.