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THUMPD3 THUMP domain containing 3 [ Anas platyrhynchos (mallard) ]

Gene ID: 101796215, updated on 8-Mar-2024

Summary

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Gene symbol
THUMPD3
Gene description
THUMP domain containing 3
Locus tag
Anapl_06409
See related
EnsemblRapid:ENSAPLG00030004957
Gene type
protein coding
RefSeq status
MODEL
Organism
Anas platyrhynchos
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anatinae; Anas
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 13
Exon count:
9
Annotation release Status Assembly Chr Location
104 current ZJU1.0 (GCF_015476345.1) 13 NC_051784.1 (676473..681947, complement)
103 previous assembly IASCAAS_PekingDuck_PBH1.5 (GCF_003850225.1) 13 NC_040058.1 (530425..536102, complement)

Chromosome 13 - NC_051784.1Genomic Context describing neighboring genes Neighboring gene interleukin 1 receptor associated kinase 2 Neighboring gene von Hippel-Lindau tumor suppressor Neighboring gene SLIT-ROBO Rho GTPase activating protein 3 Neighboring gene RAD18 E3 ubiquitin protein ligase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables tRNA (guanine) methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in tRNA methylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
THUMP domain-containing protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Anas platyrhynchos Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ZJU1.0 Primary Assembly

Genomic

  1. NC_051784.1 Reference ZJU1.0 Primary Assembly

    Range
    676473..681947 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027467676.2 → XP_027323477.2  THUMP domain-containing protein 3

    UniProtKB/TrEMBL
    U3I768
    Related
    ENSAPLP00030010254.1, ENSAPLT00030013269.1
    Conserved Domains (3) summary
    cd11715
    Location:23 → 283
    THUMP_AdoMetMT; THUMP domain associated with S-adenosylmethionine-dependent methyltransferases
    PHA03169
    Location:148 → 218
    PHA03169; hypothetical protein; Provisional
    pfam01170
    Location:290 → 475
    UPF0020; Putative RNA methylase family UPF0020
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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