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ESRP2 epithelial splicing regulatory protein 2 [ Anas platyrhynchos (mallard) ]

Gene ID: 101795796, updated on 8-Mar-2024

Summary

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Gene symbol
ESRP2
Gene description
epithelial splicing regulatory protein 2
Locus tag
Anapl_06525
See related
EnsemblRapid:ENSAPLG00030021712
Gene type
protein coding
RefSeq status
MODEL
Organism
Anas platyrhynchos
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anatinae; Anas
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 12
Exon count:
19
Annotation release Status Assembly Chr Location
104 current ZJU1.0 (GCF_015476345.1) 12 NC_051783.1 (14159958..14204825)
103 previous assembly IASCAAS_PekingDuck_PBH1.5 (GCF_003850225.1) 12 NC_040057.1 (20834695..20879995, complement)

Chromosome 12 - NC_051783.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106019019 Neighboring gene sphingomyelin phosphodiesterase 3 Neighboring gene uncharacterized LOC106019018 Neighboring gene phospholipase A2 group XV Neighboring gene nuclear factor of activated T cells 3 Neighboring gene uncharacterized LOC110353836

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of RNA splicing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of ribonucleoprotein complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
epithelial splicing regulatory protein 2
Names
RNA-binding protein 35B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Anas platyrhynchos Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ZJU1.0 Primary Assembly

Genomic

  1. NC_051783.1 Reference ZJU1.0 Primary Assembly

    Range
    14159958..14204825
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021276490.3 → XP_021132165.1  epithelial splicing regulatory protein 2 isoform X2

    UniProtKB/TrEMBL
    A0A493TXB6
    Conserved Domains (5) summary
    cd12254
    Location:673 → 745
    RRM_hnRNPH_ESRPs_RBM12_like; RNA recognition motif found in heterogeneous nuclear ribonucleoprotein (hnRNP) H protein family, epithelial splicing regulatory proteins (ESRPs), Drosophila RNA-binding protein Fusilli, RNA-binding protein 12 (RBM12) and similar proteins
    cd12737
    Location:250 → 329
    RRM1_ESRP2; RNA recognition motif 1 in epithelial splicing regulatory protein 2 (ESRP2) and similar proteins
    cd12740
    Location:334 → 440
    RRM2_ESRP2; RNA recognition motif 2 in epithelial splicing regulatory protein 2 (ESRP2) and similar proteins
    cd12742
    Location:469 → 549
    RRM3_ESRP1_ESRP2; RNA recognition motif in epithelial splicing regulatory protein ESRP1, ESRP2 and similar proteins
    cl10012
    Location:32 → 216
    DnaQ_like_exo; DnaQ-like (or DEDD) 3'-5' exonuclease domain superfamily

  2. XM_021276492.3 → XP_021132167.1  epithelial splicing regulatory protein 2 isoform X6

    UniProtKB/TrEMBL
    R0L9K1
    Conserved Domains (4) summary
    cd12740
    Location:334 → 440
    RRM2_ESRP2; RNA recognition motif 2 (RRM2) found in epithelial splicing regulatory protein 2 (ESRP2) and similar proteins
    cd12742
    Location:469 → 549
    RRM3_ESRP1_ESRP2; RNA recognition motif 3 (RRM3) found in epithelial splicing regulatory protein ESRP1, ESRP2 and similar proteins
    cl10012
    Location:32 → 216
    DnaQ_like_exo; DnaQ-like (or DEDD) 3'-5' exonuclease domain superfamily
    cl17169
    Location:240 → 332
    RRM_SF; RNA recognition motif (RRM) superfamily

  3. XM_021276489.3 → XP_021132164.1  epithelial splicing regulatory protein 2 isoform X1

    UniProtKB/TrEMBL
    A0A493TXB6
    Related
    ENSAPLP00030036585.1, ENSAPLT00030056845.1
    Conserved Domains (6) summary
    cd12254
    Location:677 → 749
    RRM_hnRNPH_ESRPs_RBM12_like; RNA recognition motif found in heterogeneous nuclear ribonucleoprotein (hnRNP) H protein family, epithelial splicing regulatory proteins (ESRPs), Drosophila RNA-binding protein Fusilli, RNA-binding protein 12 (RBM12) and similar proteins
    cd12737
    Location:250 → 329
    RRM1_ESRP2; RNA recognition motif 1 in epithelial splicing regulatory protein 2 (ESRP2) and similar proteins
    cd12740
    Location:334 → 440
    RRM2_ESRP2; RNA recognition motif 2 in epithelial splicing regulatory protein 2 (ESRP2) and similar proteins
    cd12742
    Location:469 → 549
    RRM3_ESRP1_ESRP2; RNA recognition motif in epithelial splicing regulatory protein ESRP1, ESRP2 and similar proteins
    pfam11029
    Location:592 → 645
    DAZAP2; DAZ associated protein 2 (DAZAP2)
    cl10012
    Location:32 → 216
    DnaQ_like_exo; DnaQ-like (or DEDD) 3'-5' exonuclease domain superfamily

  4. XM_013105264.4 → XP_012960718.1  epithelial splicing regulatory protein 2 isoform X3

    UniProtKB/TrEMBL
    A0A493TXB6
    Related
    ENSAPLP00030036628.1, ENSAPLT00030056914.1
    Conserved Domains (6) summary
    COG0724
    Location:671 → 733
    RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
    cd12254
    Location:667 → 739
    RRM_hnRNPH_ESRPs_RBM12_like; RNA recognition motif found in heterogeneous nuclear ribonucleoprotein (hnRNP) H protein family, epithelial splicing regulatory proteins (ESRPs), Drosophila RNA-binding protein Fusilli, RNA-binding protein 12 (RBM12) and similar proteins
    cd12737
    Location:240 → 319
    RRM1_ESRP2; RNA recognition motif 1 in epithelial splicing regulatory protein 2 (ESRP2) and similar proteins
    cd12740
    Location:324 → 430
    RRM2_ESRP2; RNA recognition motif 2 in epithelial splicing regulatory protein 2 (ESRP2) and similar proteins
    cd12742
    Location:459 → 539
    RRM3_ESRP1_ESRP2; RNA recognition motif in epithelial splicing regulatory protein ESRP1, ESRP2 and similar proteins
    cl10012
    Location:22 → 206
    DnaQ_like_exo; DnaQ-like (or DEDD) 3'-5' exonuclease domain superfamily

  5. XM_027466919.2 → XP_027322720.1  epithelial splicing regulatory protein 2 isoform X7

    UniProtKB/TrEMBL
    A0A493TXB6

  6. XM_021276491.3 → XP_021132166.1  epithelial splicing regulatory protein 2 isoform X5

    UniProtKB/TrEMBL
    U3IAB4
    Related
    ENSAPLP00030036538.1, ENSAPLT00030056769.1
    Conserved Domains (4) summary
    cd12740
    Location:334 → 440
    RRM2_ESRP2; RNA recognition motif 2 (RRM2) found in epithelial splicing regulatory protein 2 (ESRP2) and similar proteins
    cd12742
    Location:469 → 549
    RRM3_ESRP1_ESRP2; RNA recognition motif 3 (RRM3) found in epithelial splicing regulatory protein ESRP1, ESRP2 and similar proteins
    cl10012
    Location:32 → 216
    DnaQ_like_exo; DnaQ-like (or DEDD) 3'-5' exonuclease domain superfamily
    cl17169
    Location:240 → 332
    RRM_SF; RNA recognition motif (RRM) superfamily

  7. XM_038185298.1 → XP_038041226.1  epithelial splicing regulatory protein 2 isoform X4

    UniProtKB/TrEMBL
    A0A493T8W5, A0A493TXB6
    Related
    ENSAPLP00030036676.1, ENSAPLT00030056992.1
    Conserved Domains (4) summary
    cd12740
    Location:311 → 417
    RRM2_ESRP2; RNA recognition motif 2 (RRM2) found in epithelial splicing regulatory protein 2 (ESRP2) and similar proteins
    cd12742
    Location:446 → 526
    RRM3_ESRP1_ESRP2; RNA recognition motif 3 (RRM3) found in epithelial splicing regulatory protein ESRP1, ESRP2 and similar proteins
    cl10012
    Location:9 → 193
    DnaQ_like_exo; DnaQ-like (or DEDD) 3'-5' exonuclease domain superfamily
    cl17169
    Location:217 → 309
    RRM_SF; RNA recognition motif (RRM) superfamily
Nucleotide Protein
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