U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

METTL15 methyltransferase 15, mitochondrial 12S rRNA N4-cytidine [ Anas platyrhynchos (mallard) ]

Gene ID: 101793902, updated on 8-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
METTL15
Gene description
methyltransferase 15, mitochondrial 12S rRNA N4-cytidine
Locus tag
Anapl_04815
See related
EnsemblRapid:ENSAPLG00030013004
Gene type
protein coding
RefSeq status
MODEL
Organism
Anas platyrhynchos
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anatinae; Anas
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 5
Exon count:
8
Annotation release Status Assembly Chr Location
104 current ZJU1.0 (GCF_015476345.1) 5 NC_051776.1 (58440971..58538074)
103 previous assembly IASCAAS_PekingDuck_PBH1.5 (GCF_003850225.1) 5 NC_040050.1 (60855061..60949631)

Chromosome 5 - NC_051776.1Genomic Context describing neighboring genes Neighboring gene brain derived neurotrophic factor Neighboring gene kinesin family member 18A Neighboring gene uncharacterized LOC119717151 Neighboring gene uncharacterized LOC110353153 Neighboring gene uncharacterized LOC113843772

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables rRNA (cytosine-N4-)-methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in rRNA base methylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
12S rRNA N4-methylcytidine (m4C) methyltransferase
Names
Putative S-adenosyl-L-methionine-dependent methyltransferase METT5D1
methyltransferase like 15

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Anas platyrhynchos Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ZJU1.0 Primary Assembly

Genomic

  1. NC_051776.1 Reference ZJU1.0 Primary Assembly

    Range
    58440971..58538074
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027458141.2 → XP_027313942.2  12S rRNA N4-methylcytidine (m4C) methyltransferase

    UniProtKB/TrEMBL
    A0A8B9SX37, U3I8R0
    Conserved Domains (1) summary
    PRK00050
    Location:70 → 405
    PRK00050; 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH

  2. XM_038180194.1 → XP_038036122.1  12S rRNA N4-methylcytidine (m4C) methyltransferase

    UniProtKB/TrEMBL
    A0A8B9SX37, U3I8R0
    Conserved Domains (1) summary
    PRK00050
    Location:70 → 405
    PRK00050; 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH

  3. XM_038180193.1 → XP_038036121.1  12S rRNA N4-methylcytidine (m4C) methyltransferase

    UniProtKB/TrEMBL
    A0A8B9SX37, U3I8R0
    Related
    ENSAPLP00030022812.1, ENSAPLT00030033577.1
    Conserved Domains (1) summary
    PRK00050
    Location:70 → 405
    PRK00050; 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH

  4. XM_038180195.1 → XP_038036123.1  12S rRNA N4-methylcytidine (m4C) methyltransferase

    UniProtKB/TrEMBL
    A0A8B9SX37, U3I8R0
    Conserved Domains (1) summary
    PRK00050
    Location:70 → 405
    PRK00050; 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.