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HPCAL1 hippocalcin like 1 [ Anas platyrhynchos (mallard) ]

Gene ID: 101789457, updated on 8-Mar-2024

Summary

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Gene symbol
HPCAL1
Gene description
hippocalcin like 1
Locus tag
Anapl_08380
See related
EnsemblRapid:ENSAPLG00030004273
Gene type
protein coding
RefSeq status
MODEL
Organism
Anas platyrhynchos
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anatinae; Anas
Orthologs
human all
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Genomic context

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Location:
chromosome: 3
Exon count:
7
Annotation release Status Assembly Chr Location
104 current ZJU1.0 (GCF_015476345.1) 3 NC_051774.1 (104123966..104167892)
103 previous assembly IASCAAS_PekingDuck_PBH1.5 (GCF_003850225.1) 3 NC_040048.1 (102812326..102857020)

Chromosome 3 - NC_051774.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110351743 Neighboring gene uncharacterized LOC106015290 Neighboring gene ornithine decarboxylase 1 Neighboring gene uncharacterized LOC106015291

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hippocalcin-like protein 1
Names
Hippocalcin-like protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Anas platyrhynchos Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ZJU1.0 Primary Assembly

Genomic

  1. NC_051774.1 Reference ZJU1.0 Primary Assembly

    Range
    104123966..104167892
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027455231.2 → XP_027311032.1  hippocalcin-like protein 1

    UniProtKB/TrEMBL
    R0K6G4
    Conserved Domains (1) summary
    COG5126
    Location:13 → 179
    FRQ1; Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms]

  2. XM_027455228.2 → XP_027311029.1  hippocalcin-like protein 1

    UniProtKB/TrEMBL
    R0K6G4
    Conserved Domains (1) summary
    COG5126
    Location:13 → 179
    FRQ1; Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms]

  3. XM_027455232.2 → XP_027311033.1  hippocalcin-like protein 1

    UniProtKB/TrEMBL
    R0K6G4
    Related
    ENSAPLP00030009063.1, ENSAPLT00030011541.1
    Conserved Domains (1) summary
    COG5126
    Location:13 → 179
    FRQ1; Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms]

  4. XM_038176341.1 → XP_038032269.1  hippocalcin-like protein 1

    UniProtKB/TrEMBL
    R0K6G4
    Conserved Domains (1) summary
    COG5126
    Location:13 → 179
    FRQ1; Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms]

  5. XM_005014107.5 → XP_005014164.1  hippocalcin-like protein 1

    See identical proteins and their annotated locations for XP_005014164.1

    UniProtKB/TrEMBL
    R0K6G4
    Conserved Domains (1) summary
    COG5126
    Location:13 → 179
    FRQ1; Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms]

  6. XM_005014109.5 → XP_005014166.1  hippocalcin-like protein 1

    See identical proteins and their annotated locations for XP_005014166.1

    UniProtKB/TrEMBL
    R0K6G4
    Conserved Domains (1) summary
    COG5126
    Location:13 → 179
    FRQ1; Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms]

  7. XM_038176342.1 → XP_038032270.1  hippocalcin-like protein 1

    UniProtKB/TrEMBL
    R0K6G4
    Conserved Domains (1) summary
    COG5126
    Location:13 → 179
    FRQ1; Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms]
Nucleotide Protein
Heading Accession and Version

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