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LOC101769948 NAD-dependent protein deacetylase SRT1 [ Setaria italica (foxtail millet) ]

Gene ID: 101769948, updated on 21-Dec-2023

Summary

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Gene symbol
LOC101769948
Gene description
NAD-dependent protein deacetylase SRT1
Locus tag
SETIT_010248mg
Gene type
protein coding
RefSeq status
MODEL
Organism
Setaria italica
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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Genomic context

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Location:
chromosome: VII
Exon count:
16
Annotation release Status Assembly Chr Location
103 current Setaria_italica_v2.0 (GCF_000263155.2) VII NC_028456.1 (11118974..11133595, complement)
101 previous assembly Setaria V1 (GCF_000263155.1) Unplaced Scaffold NW_004675967.1 (11118988..11129795, complement)

Chromosome VII - NC_028456.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC101769672 Neighboring gene uncharacterized LOC111258055 Neighboring gene DNA primase small subunit Neighboring gene translation initiation factor IF-2-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables NAD+ binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
NAD-dependent protein deacetylase SRT1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Setaria italica Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Setaria_italica_v2.0 Primary Assembly

Genomic

  1. NC_028456.1 Reference Setaria_italica_v2.0 Primary Assembly

    Range
    11118974..11133595 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022828255.1 → XP_022683990.1  NAD-dependent protein deacetylase SRT1 isoform X1

    UniProtKB/TrEMBL
    A0A368RTG6
    Conserved Domains (1) summary
    cd01410
    Location:45 → 252
    SIRT7; Eukaryotic and prokaryotic group (class4) which includes human sirtuin SIRT6, SIRT7, and several bacterial homologs; and are members of the SIR2 family of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein ...

  2. XM_012847830.2 → XP_012703284.1  NAD-dependent protein deacetylase SRT1 isoform X2

    UniProtKB/TrEMBL
    A0A368RRN0
    Conserved Domains (1) summary
    cd01410
    Location:42 → 249
    SIRT7; Eukaryotic and prokaryotic group (class4) which includes human sirtuin SIRT6, SIRT7, and several bacterial homologs; and are members of the SIR2 family of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein ...

  3. XM_004975109.2 → XP_004975166.1  NAD-dependent protein deacetylase SRT1 isoform X1

    UniProtKB/TrEMBL
    A0A368RTG6
    Conserved Domains (1) summary
    cd01410
    Location:45 → 252
    SIRT7; Eukaryotic and prokaryotic group (class4) which includes human sirtuin SIRT6, SIRT7, and several bacterial homologs; and are members of the SIR2 family of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein ...

  4. XM_012847831.3 → XP_012703285.1  NAD-dependent protein deacetylase SRT1 isoform X3

    UniProtKB/TrEMBL
    K3Y7Q7
    Conserved Domains (1) summary
    cd01410
    Location:1 → 180
    SIRT7; SIRT7: Eukaryotic and prokaryotic group (class4) which includes human sirtuin SIRT6, SIRT7, and several bacterial homologs; and are members of the SIR2 family of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent ...
Nucleotide Protein Strain
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