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Pnpla8 patatin like phospholipase domain containing 8 [ Heterocephalus glaber (naked mole-rat) ]

Gene ID: 101725854, updated on 8-Mar-2024

Summary

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Gene symbol
Pnpla8
Gene description
patatin like phospholipase domain containing 8
See related
Ensembl:ENSHGLG00000016141
Gene type
protein coding
RefSeq status
MODEL
Organism
Heterocephalus glaber
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Heterocephalus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
102 current HetGla_female_1.0 (GCF_000247695.1) Unplaced Scaffold NW_004624739.1 (21252812..21305118)

NW_004624739.1Genomic Context describing neighboring genes Neighboring gene translationally-controlled tumor protein pseudogene Neighboring gene THAP domain containing 5 Neighboring gene neuronal cell adhesion molecule Neighboring gene nucleolin-like Neighboring gene laminin subunit beta 4 Neighboring gene uncharacterized LOC110348023

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004624739 Unplaced Scaffold Reference HetGla_female_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium-independent phospholipase A2 activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in arachidonic acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
calcium-independent phospholipase A2-gamma

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Heterocephalus glaber Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HetGla_female_1.0 Primary Assembly

Genomic

  1. NW_004624739.1 Reference HetGla_female_1.0 Primary Assembly

    Range
    21252812..21305118
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021253906.1 → XP_021109565.1  calcium-independent phospholipase A2-gamma isoform X3

    UniProtKB/TrEMBL
    G5C0C9
    Conserved Domains (1) summary
    cd07211
    Location:432 → 694
    Pat_PNPLA8; Patatin-like phospholipase domain containing protein 8

  2. XM_021253907.1 → XP_021109566.1  calcium-independent phospholipase A2-gamma isoform X4

    UniProtKB/TrEMBL
    G5C0C9
    Conserved Domains (1) summary
    cd07211
    Location:432 → 688
    Pat_PNPLA8; Patatin-like phospholipase domain containing protein 8

  3. XM_013070306.2 → XP_012925760.1  calcium-independent phospholipase A2-gamma isoform X1

    See identical proteins and their annotated locations for XP_012925760.1

    UniProtKB/TrEMBL
    A0A0P6J2X4, G5C0C9
    Conserved Domains (1) summary
    cd07211
    Location:432 → 738
    Pat_PNPLA8; Patatin-like phospholipase domain containing protein 8

  4. XM_021253905.1 → XP_021109564.1  calcium-independent phospholipase A2-gamma isoform X2

    UniProtKB/TrEMBL
    G5C0C9
    Conserved Domains (1) summary
    cd07211
    Location:419 → 725
    Pat_PNPLA8; Patatin-like phospholipase domain containing protein 8

  5. XM_021253904.1 → XP_021109563.1  calcium-independent phospholipase A2-gamma isoform X1

    UniProtKB/TrEMBL
    A0A0P6J2X4, G5C0C9
    Related
    ENSHGLP00000022627.1, ENSHGLT00000022841.1
    Conserved Domains (1) summary
    cd07211
    Location:432 → 738
    Pat_PNPLA8; Patatin-like phospholipase domain containing protein 8

  6. XM_021253908.1 → XP_021109567.1  calcium-independent phospholipase A2-gamma isoform X5

    UniProtKB/TrEMBL
    G5C0C9
    Conserved Domains (1) summary
    cd07211
    Location:320 → 626
    Pat_PNPLA8; Patatin-like phospholipase domain containing protein 8

  7. XM_013070308.2 → XP_012925762.1  calcium-independent phospholipase A2-gamma isoform X6

    Conserved Domains (1) summary
    cd07211
    Location:207 → 513
    Pat_PNPLA8; Patatin-like phospholipase domain containing protein 8
Nucleotide Protein
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