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Marchf1 membrane associated ring-CH-type finger 1 [ Heterocephalus glaber (naked mole-rat) ]

Gene ID: 101724772, updated on 8-Mar-2024

Summary

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Gene symbol
Marchf1
Gene description
membrane associated ring-CH-type finger 1
See related
Ensembl:ENSHGLG00000008819
Gene type
protein coding
RefSeq status
MODEL
Organism
Heterocephalus glaber
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Heterocephalus
Also known as
March1
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
102 current HetGla_female_1.0 (GCF_000247695.1) Unplaced Scaffold NW_004624758.1 (12528242..13321851)

NW_004624758.1Genomic Context describing neighboring genes Neighboring gene myotubularin-related protein 2 pseudogene Neighboring gene protein kinase C iota type pseudogene Neighboring gene high mobility group protein B1 pseudogene Neighboring gene uncharacterized LOC110350022 Neighboring gene translation machinery associated 16 homolog Neighboring gene transketolase like 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004624758 Unplaced Scaffold Reference HetGla_female_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables MHC protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin protein ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in antigen processing and presentation of peptide antigen via MHC class II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein polyubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in early endosome membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in late endosome membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in lysosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
E3 ubiquitin-protein ligase MARCH1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Heterocephalus glaber Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HetGla_female_1.0 Primary Assembly

Genomic

  1. NW_004624758.1 Reference HetGla_female_1.0 Primary Assembly

    Range
    12528242..13321851
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021261213.1 → XP_021116872.1  E3 ubiquitin-protein ligase MARCH1 isoform X2

    Related
    ENSHGLP00000012340.1, ENSHGLT00000012475.1
    Conserved Domains (1) summary
    cd16698
    Location:75 → 126
    RING_CH-C4HC3_MARCH1_like; RING-CH finger, H2 subclass (C4HC3-type), found in membrane-associated RING finger protein MARCH1, MARCH8, and similar proteins

  2. XM_004848232.2 → XP_004848289.1  E3 ubiquitin-protein ligase MARCH1 isoform X1

    UniProtKB/TrEMBL
    A0A0P6JA50
    Conserved Domains (1) summary
    cd16698
    Location:79 → 130
    RING_CH-C4HC3_MARCH1_like; RING-CH finger, H2 subclass (C4HC3-type), found in membrane-associated RING finger protein MARCH1, MARCH8, and similar proteins

  3. XM_021261212.1 → XP_021116871.1  E3 ubiquitin-protein ligase MARCH1 isoform X1

    UniProtKB/TrEMBL
    A0A0P6JA50
    Conserved Domains (1) summary
    cd16698
    Location:79 → 130
    RING_CH-C4HC3_MARCH1_like; RING-CH finger, H2 subclass (C4HC3-type), found in membrane-associated RING finger protein MARCH1, MARCH8, and similar proteins
Nucleotide Protein
Heading Accession and Version

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