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Tbl1x transducin beta like 1 X-linked [ Heterocephalus glaber (naked mole-rat) ]

Gene ID: 101721940, updated on 8-Mar-2024

Summary

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Gene symbol
Tbl1x
Gene description
transducin beta like 1 X-linked
Locus tag
GW7_11426
See related
Ensembl:ENSHGLG00000000673
Gene type
protein coding
RefSeq status
MODEL
Organism
Heterocephalus glaber
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Heterocephalus
Orthologs
human all
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Genomic context

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Location:
chromosome: Un
Exon count:
18
Annotation release Status Assembly Chr Location
102 current HetGla_female_1.0 (GCF_000247695.1) Unplaced Scaffold NW_004624834.1 (7086348..7281974)

NW_004624834.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110346158 Neighboring gene DCN1-like protein 1 pseudogene Neighboring gene uncharacterized LOC110346153 Neighboring gene G protein-coupled receptor 143 Neighboring gene shroom family member 2 Neighboring gene translation initiation factor IF-2-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004624834 Unplaced Scaffold Reference HetGla_female_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequencing reveals insights into physiology and longevity of the naked mole rat. Kim EB, et al. Nature, 2011 Oct 12. PMID 21993625, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription corepressor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of histone deacetylase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
F-box-like/WD repeat-containing protein TBL1X
Names
transducin beta like 1X-linked

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Heterocephalus glaber Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HetGla_female_1.0 Primary Assembly

Genomic

  1. NW_004624834.1 Reference HetGla_female_1.0 Primary Assembly

    Range
    7086348..7281974
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004867357.3 → XP_004867414.1  F-box-like/WD repeat-containing protein TBL1X

    See identical proteins and their annotated locations for XP_004867414.1

    Conserved Domains (3) summary
    cd00200
    Location:175 → 481
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:183 → 230
    7WD40; WD40 repeat [structural motif]
    pfam08513
    Location:6 → 32
    LisH; LisH

  2. XM_013066478.2 → XP_012921932.1  F-box-like/WD repeat-containing protein TBL1X

    See identical proteins and their annotated locations for XP_012921932.1

    Related
    ENSHGLP00000000810.1, ENSHGLT00000000850.1
    Conserved Domains (3) summary
    cd00200
    Location:175 → 481
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:183 → 230
    7WD40; WD40 repeat [structural motif]
    pfam08513
    Location:6 → 32
    LisH; LisH

  3. XM_021246388.1 → XP_021102047.1  F-box-like/WD repeat-containing protein TBL1X

    Related
    ENSHGLP00000000811.1, ENSHGLT00000000851.1
    Conserved Domains (3) summary
    cd00200
    Location:175 → 481
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:183 → 230
    7WD40; WD40 repeat [structural motif]
    pfam08513
    Location:6 → 32
    LisH; LisH

RNA

  1. XR_206181.3 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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