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Bclaf3 BCLAF1 and THRAP3 family member 3 [ Heterocephalus glaber (naked mole-rat) ]

Gene ID: 101718780, updated on 8-Mar-2024

Summary

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Gene symbol
Bclaf3
Gene description
BCLAF1 and THRAP3 family member 3
See related
Ensembl:ENSHGLG00000001058
Gene type
protein coding
RefSeq status
MODEL
Organism
Heterocephalus glaber
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Heterocephalus
Also known as
CUNHXorf23
Orthologs
human mouse all
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Genomic context

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See Bclaf3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
102 current HetGla_female_1.0 (GCF_000247695.1) Unplaced Scaffold NW_004624829.1 (4749176..4809482, complement)

NW_004624829.1Genomic Context describing neighboring genes Neighboring gene SH3 domain containing kinase binding protein 1 Neighboring gene putative monooxygenase p33MONOX pseudogene Neighboring gene prefoldin subunit 4 pseudogene Neighboring gene MAP7 domain containing 2 Neighboring gene eukaryotic translation initiation factor 1A X-linked

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004624829 Unplaced Scaffold Reference HetGla_female_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription coregulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of mediator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein CXorf23 homolog
Names
chromosome unknown CXorf23 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Heterocephalus glaber Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HetGla_female_1.0 Primary Assembly

Genomic

  1. NW_004624829.1 Reference HetGla_female_1.0 Primary Assembly

    Range
    4749176..4809482 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004866165.3 → XP_004866222.1  uncharacterized protein CXorf23 homolog isoform X2

    Related
    ENSHGLP00000001367.1, ENSHGLT00000001409.1
    Conserved Domains (1) summary
    pfam15440
    Location:12 → 611
    THRAP3_BCLAF1; THRAP3/BCLAF1 family

  2. XM_004866166.3 → XP_004866223.1  uncharacterized protein CXorf23 homolog isoform X3

    Conserved Domains (1) summary
    pfam15440
    Location:12 → 586
    THRAP3_BCLAF1; THRAP3/BCLAF1 family

  3. XM_013066045.2 → XP_012921499.1  uncharacterized protein CXorf23 homolog isoform X1

    See identical proteins and their annotated locations for XP_012921499.1

    Conserved Domains (1) summary
    pfam15440
    Location:3 → 642
    THRAP3_BCLAF1; THRAP3/BCLAF1 family

  4. XM_004866164.3 → XP_004866221.1  uncharacterized protein CXorf23 homolog isoform X1

    See identical proteins and their annotated locations for XP_004866221.1

    Related
    ENSHGLP00000001368.1, ENSHGLT00000001410.1
    Conserved Domains (1) summary
    pfam15440
    Location:3 → 642
    THRAP3_BCLAF1; THRAP3/BCLAF1 family

  5. XM_021245335.1 → XP_021100994.1  uncharacterized protein CXorf23 homolog isoform X1

    Conserved Domains (1) summary
    pfam15440
    Location:3 → 642
    THRAP3_BCLAF1; THRAP3/BCLAF1 family
Nucleotide Protein
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