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Dennd1b DENN domain containing 1B [ Heterocephalus glaber (naked mole-rat) ]

Gene ID: 101713291, updated on 8-Mar-2024

Summary

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Gene symbol
Dennd1b
Gene description
DENN domain containing 1B
See related
Ensembl:ENSHGLG00000005659
Gene type
protein coding
RefSeq status
MODEL
Organism
Heterocephalus glaber
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Heterocephalus
Orthologs
human mouse all
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Genomic context

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See Dennd1b in Genome Data Viewer
Location:
chromosome: Un
Exon count:
24
Annotation release Status Assembly Chr Location
102 current HetGla_female_1.0 (GCF_000247695.1) Unplaced Scaffold NW_004624798.1 (2621604..2844370)

NW_004624798.1Genomic Context describing neighboring genes Neighboring gene chromosome unknown C1orf53 homolog Neighboring gene 40S ribosomal protein SA pseudogene Neighboring gene crumbs cell polarity complex component 1 Neighboring gene 60S ribosomal protein L35a pseudogene

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004624798 Unplaced Scaffold Reference HetGla_female_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables guanyl-nucleotide exchange factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidylinositol phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in T cell receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endocytic recycling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in intracellular membrane-bounded organelle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nuclear speck IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DENN domain-containing protein 1B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Heterocephalus glaber Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HetGla_female_1.0 Primary Assembly

Genomic

  1. NW_004624798.1 Reference HetGla_female_1.0 Primary Assembly

    Range
    2621604..2844370
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021240652.1 → XP_021096311.1  DENN domain-containing protein 1B isoform X3

    Conserved Domains (3) summary
    smart00801
    Location:285 → 350
    dDENN; Domain always found downstream of DENN domain, found in a variety of signalling proteins
    smart00799
    Location:56 → 253
    DENN; Domain found in a variety of signalling proteins, always encircled by uDENN and dDENN
    smart00800
    Location:20 → 51
    uDENN; Domain always found upstream of DENN domain, found in a variety of signalling proteins

  2. XM_021240649.1 → XP_021096308.1  DENN domain-containing protein 1B isoform X1

    Conserved Domains (3) summary
    smart00801
    Location:323 → 388
    dDENN; Domain always found downstream of DENN domain, found in a variety of signalling proteins
    smart00799
    Location:94 → 291
    DENN; Domain found in a variety of signalling proteins, always encircled by uDENN and dDENN
    smart00800
    Location:9 → 89
    uDENN; Domain always found upstream of DENN domain, found in a variety of signalling proteins

  3. XM_021240651.1 → XP_021096310.1  DENN domain-containing protein 1B isoform X3

    Conserved Domains (3) summary
    smart00801
    Location:285 → 350
    dDENN; Domain always found downstream of DENN domain, found in a variety of signalling proteins
    smart00799
    Location:56 → 253
    DENN; Domain found in a variety of signalling proteins, always encircled by uDENN and dDENN
    smart00800
    Location:20 → 51
    uDENN; Domain always found upstream of DENN domain, found in a variety of signalling proteins

  4. XM_021240650.1 → XP_021096309.1  DENN domain-containing protein 1B isoform X2

    Related
    ENSHGLP00000007799.1, ENSHGLT00000007885.1
    Conserved Domains (3) summary
    smart00801
    Location:303 → 368
    dDENN; Domain always found downstream of DENN domain, found in a variety of signalling proteins
    smart00799
    Location:94 → 271
    DENN; Domain found in a variety of signalling proteins, always encircled by uDENN and dDENN
    smart00800
    Location:9 → 89
    uDENN; Domain always found upstream of DENN domain, found in a variety of signalling proteins
Nucleotide Protein
Heading Accession and Version

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