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Jsrp1 junctional sarcoplasmic reticulum protein 1 [ Heterocephalus glaber (naked mole-rat) ]

Gene ID: 101712353, updated on 8-Mar-2024

Summary

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Gene symbol
Jsrp1
Gene description
junctional sarcoplasmic reticulum protein 1
See related
Ensembl:ENSHGLG00000014972
Gene type
protein coding
RefSeq status
MODEL
Organism
Heterocephalus glaber
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Heterocephalus
Orthologs
human mouse all
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Genomic context

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See Jsrp1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
102 current HetGla_female_1.0 (GCF_000247695.1) Unplaced Scaffold NW_004624828.1 (6629978..6635092)

NW_004624828.1Genomic Context describing neighboring genes Neighboring gene PEAK family member 3 Neighboring gene ornithine decarboxylase antizyme 1 Neighboring gene anti-Mullerian hormone Neighboring gene splicing factor 3a subunit 2 Neighboring gene pleckstrin homology domain containing J1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004624828 Unplaced Scaffold Reference HetGla_female_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in regulation of ryanodine-sensitive calcium-release channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in skeletal muscle contraction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in sarcoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
junctional sarcoplasmic reticulum protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Heterocephalus glaber Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HetGla_female_1.0 Primary Assembly

Genomic

  1. NW_004624828.1 Reference HetGla_female_1.0 Primary Assembly

    Range
    6629978..6635092
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021245050.1 → XP_021100709.1  junctional sarcoplasmic reticulum protein 1 isoform X1

    UniProtKB/TrEMBL
    G5BBC5
    Conserved Domains (2) summary
    pfam15312
    Location:119 → 173
    JSRP; Junctional sarcoplasmic reticulum protein
    cl28310
    Location:167 → 375
    Rho; Transcription termination factor Rho [Transcription]

  2. XM_021245051.1 → XP_021100710.1  junctional sarcoplasmic reticulum protein 1 isoform X2

    UniProtKB/TrEMBL
    G5BBC5
    Conserved Domains (2) summary
    pfam15312
    Location:119 → 173
    JSRP; Junctional sarcoplasmic reticulum protein
    cl28310
    Location:151 → 345
    Rho; Transcription termination factor Rho [Transcription]

  3. XM_021245052.1 → XP_021100711.1  junctional sarcoplasmic reticulum protein 1 isoform X3

    UniProtKB/TrEMBL
    A0A0P6JFG7, G5BBC5
    Related
    ENSHGLP00000020950.1, ENSHGLT00000021153.1
    Conserved Domains (2) summary
    pfam15312
    Location:119 → 173
    JSRP; Junctional sarcoplasmic reticulum protein
    cl28310
    Location:150 → 337
    Rho; Transcription termination factor Rho [Transcription]

  4. XM_004865887.3 → XP_004865944.1  junctional sarcoplasmic reticulum protein 1 isoform X1

    UniProtKB/TrEMBL
    G5BBC5
    Conserved Domains (2) summary
    pfam15312
    Location:119 → 173
    JSRP; Junctional sarcoplasmic reticulum protein
    cl28310
    Location:167 → 375
    Rho; Transcription termination factor Rho [Transcription]
Nucleotide Protein
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