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Ecpas Ecm29 proteasome adaptor and scaffold [ Heterocephalus glaber (naked mole-rat) ]

Gene ID: 101710682, updated on 8-Mar-2024

Summary

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Gene symbol
Ecpas
Gene description
Ecm29 proteasome adaptor and scaffold
Locus tag
GW7_20053
See related
Ensembl:ENSHGLG00000014272
Gene type
protein coding
RefSeq status
MODEL
Organism
Heterocephalus glaber
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Heterocephalus
Also known as
Kiaa0368
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
52
Annotation release Status Assembly Chr Location
102 current HetGla_female_1.0 (GCF_000247695.1) Unplaced Scaffold NW_004624758.1 (67558..194653)

NW_004624758.1Genomic Context describing neighboring genes Neighboring gene endogenous retrovirus group PABLB member 1 Env polyprotein Neighboring gene uncharacterized LOC106009716 Neighboring gene olfactory receptor 2K2 Neighboring gene transcriptional coactivator YAP1 pseudogene

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004624758 Unplaced Scaffold Reference HetGla_female_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequencing reveals insights into physiology and longevity of the naked mole rat. Kim EB, et al. Nature, 2011 Oct 12. PMID 21993625, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables molecular adaptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proteasome assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
proteasome-associated protein ECM29 homolog
Names
Proteasome-associated protein ECM29-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Heterocephalus glaber Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HetGla_female_1.0 Primary Assembly

Genomic

  1. NW_004624758.1 Reference HetGla_female_1.0 Primary Assembly

    Range
    67558..194653
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004848121.3 → XP_004848178.1  proteasome-associated protein ECM29 homolog isoform X4

    UniProtKB/TrEMBL
    G5B5V6
    Related
    ENSHGLP00000019930.1, ENSHGLT00000020130.1
    Conserved Domains (3) summary
    pfam12755
    Location:1136 → 1221
    Vac14_Fab1_bd; Vacuolar 14 Fab1-binding region
    pfam13001
    Location:10 → 516
    Ecm29; Proteasome stabilizer
    sd00044
    Location:1079 → 1102
    HEAT; HEAT repeat [structural motif]

  2. XM_004848120.3 → XP_004848177.1  proteasome-associated protein ECM29 homolog isoform X2

    UniProtKB/TrEMBL
    G5B5V6
    Conserved Domains (3) summary
    pfam12755
    Location:1142 → 1227
    Vac14_Fab1_bd; Vacuolar 14 Fab1-binding region
    pfam13001
    Location:16 → 522
    Ecm29; Proteasome stabilizer
    sd00044
    Location:1085 → 1108
    HEAT; HEAT repeat [structural motif]

  3. XM_004848122.3 → XP_004848179.1  proteasome-associated protein ECM29 homolog isoform X3

    UniProtKB/TrEMBL
    G5B5V6
    Conserved Domains (3) summary
    pfam12755
    Location:1136 → 1221
    Vac14_Fab1_bd; Vacuolar 14 Fab1-binding region
    pfam13001
    Location:10 → 516
    Ecm29; Proteasome stabilizer
    sd00044
    Location:1079 → 1102
    HEAT; HEAT repeat [structural motif]

  4. XM_021261134.1 → XP_021116793.1  proteasome-associated protein ECM29 homolog isoform X1

    UniProtKB/TrEMBL
    G5B5V6
    Conserved Domains (3) summary
    sd00044
    Location:1087 → 1110
    HEAT; HEAT repeat [structural motif]
    pfam12755
    Location:1156 → 1229
    Vac14_Fab1_bd; Vacuolar 14 Fab1-binding region
    pfam13001
    Location:18 → 524
    Ecm29; Proteasome stabilizer

  5. XM_021261135.1 → XP_021116794.1  proteasome-associated protein ECM29 homolog isoform X5

    UniProtKB/TrEMBL
    G5B5V6
    Conserved Domains (3) summary
    sd00044
    Location:962 → 985
    HEAT; HEAT repeat [structural motif]
    pfam12755
    Location:1031 → 1104
    Vac14_Fab1_bd; Vacuolar 14 Fab1-binding region
    pfam13001
    Location:42 → 399
    Ecm29; Proteasome stabilizer
Nucleotide Protein
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