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Dtx3 deltex E3 ubiquitin ligase 3 [ Heterocephalus glaber (naked mole-rat) ]

Gene ID: 101709686, updated on 8-Mar-2024

Summary

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Gene symbol
Dtx3
Gene description
deltex E3 ubiquitin ligase 3
See related
Ensembl:ENSHGLG00000018915
Gene type
protein coding
RefSeq status
MODEL
Organism
Heterocephalus glaber
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Heterocephalus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
102 current HetGla_female_1.0 (GCF_000247695.1) Unplaced Scaffold NW_004624802.1 (10353488..10359690, complement)

NW_004624802.1Genomic Context describing neighboring genes Neighboring gene Solute carrier family 26 member 10 Neighboring gene Rho guanine nucleotide exchange factor 25 Neighboring gene phosphatidylinositol-5-phosphate 4-kinase type 2 gamma Neighboring gene kinesin family member 5A

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004624802 Unplaced Scaffold Reference HetGla_female_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in Notch signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein ubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable E3 ubiquitin-protein ligase DTX3
Names
deltex homolog 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Heterocephalus glaber Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HetGla_female_1.0 Primary Assembly

Genomic

  1. NW_004624802.1 Reference HetGla_female_1.0 Primary Assembly

    Range
    10353488..10359690 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013078296.2 → XP_012933750.1  probable E3 ubiquitin-protein ligase DTX3 isoform X1

    See identical proteins and their annotated locations for XP_012933750.1

    UniProtKB/TrEMBL
    G5BEC7
    Conserved Domains (2) summary
    cd09633
    Location:214 → 346
    Deltex_C; Domain found at the C-terminus of deltex-like
    cd00162
    Location:166 → 205
    RING; RING-finger (Really Interesting New Gene) domain, a specialized type of Zn-finger of 40 to 60 residues that binds two atoms of zinc; defined by the 'cross-brace' motif C-X2-C-X(9-39)-C-X(1-3)- H-X(2-3)-(N/C/H)-X2-C-X(4-48)C-X2-C; probably involved in ...

  2. XM_021241409.1 → XP_021097068.1  probable E3 ubiquitin-protein ligase DTX3 isoform X2

    UniProtKB/TrEMBL
    A0A0P6J1Z1, G5BEC7
    Conserved Domains (2) summary
    cd09633
    Location:211 → 343
    Deltex_C; Domain found at the C-terminus of deltex-like
    cd16711
    Location:163 → 203
    RING-HC_DTX3; RING finger, HC subclass, found in E3 ubiquitin-protein ligase Deltex3 (DTX3) and similar proteins

  3. XM_013078297.2 → XP_012933751.1  probable E3 ubiquitin-protein ligase DTX3 isoform X1

    See identical proteins and their annotated locations for XP_012933751.1

    UniProtKB/TrEMBL
    G5BEC7
    Conserved Domains (2) summary
    cd09633
    Location:214 → 346
    Deltex_C; Domain found at the C-terminus of deltex-like
    cd00162
    Location:166 → 205
    RING; RING-finger (Really Interesting New Gene) domain, a specialized type of Zn-finger of 40 to 60 residues that binds two atoms of zinc; defined by the 'cross-brace' motif C-X2-C-X(9-39)-C-X(1-3)- H-X(2-3)-(N/C/H)-X2-C-X(4-48)C-X2-C; probably involved in ...

  4. XM_013078298.2 → XP_012933752.1  probable E3 ubiquitin-protein ligase DTX3 isoform X2

    UniProtKB/TrEMBL
    A0A0P6J1Z1, G5BEC7
    Related
    ENSHGLP00000026591.1, ENSHGLT00000026827.1
    Conserved Domains (2) summary
    cd09633
    Location:211 → 343
    Deltex_C; Domain found at the C-terminus of deltex-like
    cd16711
    Location:163 → 203
    RING-HC_DTX3; RING finger, HC subclass, found in E3 ubiquitin-protein ligase Deltex3 (DTX3) and similar proteins
Nucleotide Protein
Heading Accession and Version

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