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Dchs1 dachsous cadherin-related 1 [ Heterocephalus glaber (naked mole-rat) ]

Gene ID: 101707793, updated on 8-Mar-2024

Summary

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Gene symbol
Dchs1
Gene description
dachsous cadherin-related 1
See related
Ensembl:ENSHGLG00000004668
Gene type
protein coding
RefSeq status
MODEL
Organism
Heterocephalus glaber
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Heterocephalus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
22
Annotation release Status Assembly Chr Location
102 current HetGla_female_1.0 (GCF_000247695.1) Unplaced Scaffold NW_004624817.1 (8111714..8147699, complement)

NW_004624817.1Genomic Context describing neighboring genes Neighboring gene integrin linked kinase Neighboring gene TATA-box binding protein associated factor 10 Neighboring gene tripeptidyl peptidase 1 Neighboring gene mitochondrial ribosomal protein L17 Neighboring gene interferon-induced very large GTPase 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004624817 Unplaced Scaffold Reference HetGla_female_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in homophilic cell adhesion via plasma membrane adhesion molecules IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protocadherin-16
Names
dachsous 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Heterocephalus glaber Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HetGla_female_1.0 Primary Assembly

Genomic

  1. NW_004624817.1 Reference HetGla_female_1.0 Primary Assembly

    Range
    8111714..8147699 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021243248.1 → XP_021098907.1  protocadherin-16

    UniProtKB/TrEMBL
    G5BBQ2
    Conserved Domains (1) summary
    cd11304
    Location:1107 → 1203
    Cadherin_repeat; Cadherin tandem repeat domain

  2. XM_021243249.1 → XP_021098908.1  protocadherin-16

    UniProtKB/TrEMBL
    G5BBQ2
    Conserved Domains (1) summary
    cd11304
    Location:1107 → 1203
    Cadherin_repeat; Cadherin tandem repeat domain

  3. XM_021243247.1 → XP_021098906.1  protocadherin-16

    UniProtKB/TrEMBL
    G5BBQ2
    Conserved Domains (1) summary
    cd11304
    Location:1107 → 1203
    Cadherin_repeat; Cadherin tandem repeat domain

  4. XM_004863412.3 → XP_004863469.1  protocadherin-16

    UniProtKB/TrEMBL
    G5BBQ2
    Related
    ENSHGLP00000006392.1, ENSHGLT00000006473.1
    Conserved Domains (1) summary
    cd11304
    Location:1107 → 1203
    Cadherin_repeat; Cadherin tandem repeat domain
Nucleotide Protein
Heading Accession and Version

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