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Kpna5 karyopherin subunit alpha 5 [ Heterocephalus glaber (naked mole-rat) ]

Gene ID: 101702824, updated on 8-Mar-2024

Summary

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Gene symbol
Kpna5
Gene description
karyopherin subunit alpha 5
See related
Ensembl:ENSHGLG00000007645
Gene type
protein coding
RefSeq status
MODEL
Organism
Heterocephalus glaber
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Heterocephalus
Orthologs
human all
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Genomic context

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Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
102 current HetGla_female_1.0 (GCF_000247695.1) Unplaced Scaffold NW_004624798.1 (12926980..12986889, complement)

NW_004624798.1Genomic Context describing neighboring genes Neighboring gene regulatory factor X6 Neighboring gene G protein-coupled receptor class C group 6 member A Neighboring gene E3 ubiquitin-protein ligase Mdm2 pseudogene Neighboring gene zinc finger containing ubiquitin peptidase 1 Neighboring gene radial spoke head component 4A

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004624798 Unplaced Scaffold Reference HetGla_female_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables nuclear import signal receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nuclear localization sequence binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in NLS-bearing protein import into nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
importin subunit alpha-6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Heterocephalus glaber Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HetGla_female_1.0 Primary Assembly

Genomic

  1. NW_004624798.1 Reference HetGla_female_1.0 Primary Assembly

    Range
    12926980..12986889 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004860172.2 → XP_004860229.1  importin subunit alpha-6

    See identical proteins and their annotated locations for XP_004860229.1

    UniProtKB/TrEMBL
    A0A0P6JBC4, G5AMZ7
    Conserved Domains (5) summary
    cd00020
    Location:257 → 365
    ARM; Armadillo/beta-catenin-like repeats. An approximately 40 amino acid long tandemly repeated sequence motif first identified in the Drosophila segment polarity gene armadillo; these repeats were also found in the mammalian armadillo homolog beta-catenin, ...
    pfam01749
    Location:6 → 102
    IBB; Importin beta binding domain
    pfam13646
    Location:255 → 357
    HEAT_2; HEAT repeats
    pfam16186
    Location:464 → 508
    Arm_3; Atypical Arm repeat
    sd00043
    Location:331 → 363
    ARM; armadillo repeat [structural motif]

  2. XM_004860171.3 → XP_004860228.1  importin subunit alpha-6

    See identical proteins and their annotated locations for XP_004860228.1

    UniProtKB/TrEMBL
    A0A0P6JBC4, G5AMZ7
    Related
    ENSHGLP00000010671.1, ENSHGLT00000010791.1
    Conserved Domains (5) summary
    cd00020
    Location:257 → 365
    ARM; Armadillo/beta-catenin-like repeats. An approximately 40 amino acid long tandemly repeated sequence motif first identified in the Drosophila segment polarity gene armadillo; these repeats were also found in the mammalian armadillo homolog beta-catenin, ...
    pfam01749
    Location:6 → 102
    IBB; Importin beta binding domain
    pfam13646
    Location:255 → 357
    HEAT_2; HEAT repeats
    pfam16186
    Location:464 → 508
    Arm_3; Atypical Arm repeat
    sd00043
    Location:331 → 363
    ARM; armadillo repeat [structural motif]
Nucleotide Protein
Heading Accession and Version

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