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Hspbap1 HSPB1 associated protein 1 [ Heterocephalus glaber (naked mole-rat) ]

Gene ID: 101699233, updated on 8-Mar-2024

Summary

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Gene symbol
Hspbap1
Gene description
HSPB1 associated protein 1
See related
Ensembl:ENSHGLG00000001996
Gene type
protein coding
RefSeq status
MODEL
Organism
Heterocephalus glaber
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Heterocephalus
Orthologs
human mouse all
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Genomic context

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See Hspbap1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
102 current HetGla_female_1.0 (GCF_000247695.1) Unplaced Scaffold NW_004624912.1 (1023981..1102153, complement)

NW_004624912.1Genomic Context describing neighboring genes Neighboring gene poly(ADP-ribose) polymerase family member 9 Neighboring gene uncharacterized LOC110347305 Neighboring gene ubiquitin-conjugating enzyme E2 K-like Neighboring gene poly(ADP-ribose) polymerase family member 14 Neighboring gene NUT family member 2G-like Neighboring gene solute carrier family 49 member 4 Neighboring gene uncharacterized LOC110347309

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004624912 Unplaced Scaffold Reference HetGla_female_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 2-oxoglutarate-dependent dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
HSPB1-associated protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Heterocephalus glaber Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HetGla_female_1.0 Primary Assembly

Genomic

  1. NW_004624912.1 Reference HetGla_female_1.0 Primary Assembly

    Range
    1023981..1102153 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021251277.1 → XP_021106936.1  HSPB1-associated protein 1 isoform X4

    UniProtKB/TrEMBL
    G5AV97
    Conserved Domains (1) summary
    pfam13621
    Location:77 → 210
    Cupin_8; Cupin-like domain

  2. XM_013068810.2 → XP_012924264.1  HSPB1-associated protein 1 isoform X2

    UniProtKB/TrEMBL
    G5AV97
    Conserved Domains (1) summary
    cl21464
    Location:37 → 246
    cupin_like; Conserved domain found in cupin and related proteins

  3. XM_004873610.3 → XP_004873667.1  HSPB1-associated protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A0P6J1G5, G5AV97
    Related
    ENSHGLP00000002651.1, ENSHGLT00000002704.1
    Conserved Domains (2) summary
    pfam13621
    Location:37 → 272
    Cupin_8; Cupin-like domain
    cl21464
    Location:175 → 380
    cupin_like; Conserved domain found in cupin and related proteins

  4. XM_013068811.2 → XP_012924265.1  HSPB1-associated protein 1 isoform X3

    UniProtKB/TrEMBL
    G5AV97
    Conserved Domains (2) summary
    pfam13621
    Location:2 → 224
    Cupin_8; Cupin-like domain
    cl21464
    Location:127 → 332
    cupin_like; Conserved domain found in cupin and related proteins
Nucleotide Protein
Heading Accession and Version

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