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Nup107 nucleoporin 107 [ Heterocephalus glaber (naked mole-rat) ]

Gene ID: 101699022, updated on 8-Mar-2024

Summary

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Gene symbol
Nup107
Gene description
nucleoporin 107
See related
Ensembl:ENSHGLG00000000927
Gene type
protein coding
RefSeq status
MODEL
Organism
Heterocephalus glaber
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Heterocephalus
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
27
Annotation release Status Assembly Chr Location
102 current HetGla_female_1.0 (GCF_000247695.1) Unplaced Scaffold NW_004624948.1 (556054..604381, complement)

NW_004624948.1Genomic Context describing neighboring genes Neighboring gene 26S protease regulatory subunit 4-like Neighboring gene solute carrier family 35 member E3 Neighboring gene RAP1B, member of RAS oncogene family Neighboring gene cyclin-dependent kinase 4-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004624948 Unplaced Scaffold Reference HetGla_female_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables structural constituent of nuclear pore IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mRNA export from nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in post-transcriptional tethering of RNA polymerase II gene DNA at nuclear periphery IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein import into nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of nuclear pore IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of nuclear pore outer ring IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
nuclear pore complex protein Nup107

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Heterocephalus glaber Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HetGla_female_1.0 Primary Assembly

Genomic

  1. NW_004624948.1 Reference HetGla_female_1.0 Primary Assembly

    Range
    556054..604381 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021252366.1 → XP_021108025.1  nuclear pore complex protein Nup107

    UniProtKB/TrEMBL
    A0A0N8ETZ0, G5BBG9
    Related
    ENSHGLP00000001188.1, ENSHGLT00000001230.1
    Conserved Domains (1) summary
    pfam04121
    Location:209 → 910
    Nup84_Nup100; Nuclear pore protein 84 / 107
Nucleotide Protein
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