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COMP cartilage oligomeric matrix protein [ Mustela putorius furo (domestic ferret) ]

Gene ID: 101694423, updated on 8-Mar-2024

Summary

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Gene symbol
COMP
Gene description
cartilage oligomeric matrix protein
See related
Ensembl:ENSMPUG00000015518
Gene type
protein coding
RefSeq status
MODEL
Organism
Mustela putorius furo (sub-species: furo)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Mustelinae; Mustela
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
19
Annotation release Status Assembly Chr Location
102 current ASM1176430v1.1 (GCF_011764305.1) Unplaced Scaffold NW_025421280.1 (26783487..26791080)
101 previous assembly MusPutFur1.0 (GCF_000215625.1) Unplaced Scaffold NW_004569218.1 (5682438..5690042)

NW_025421280.1Genomic Context describing neighboring genes Neighboring gene growth differentiation factor 1 Neighboring gene UPF1 RNA helicase and ATPase Neighboring gene CREB regulated transcription coactivator 1 Neighboring gene kelch like family member 26

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequencing, annotation, and characterization of the influenza ferret infectome. León AJ, et al. J Virol, 2013 Feb. PMID 23236062, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cartilage oligomeric matrix protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mustela putorius furo Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1176430v1.1 Primary Assembly

Genomic

  1. NW_025421280.1 Reference ASM1176430v1.1 Primary Assembly

    Range
    26783487..26791080
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004760918.3 → XP_004760975.1  cartilage oligomeric matrix protein

    UniProtKB/TrEMBL
    M3YVP7
    Related
    ENSMPUP00000015407.1
    Conserved Domains (7) summary
    smart00179
    Location:179 → 217
    EGF_CA; Calcium-binding EGF-like domain
    cd00054
    Location:126 → 160
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    sd00001
    Location:395 → 417
    TSP3; TSP3 repeat_short [structural motif]
    sd00002
    Location:300 → 335
    TSP3; TSP3 repeat_long [structural motif]
    pfam02412
    Location:301 → 335
    TSP_3; Thrombospondin type 3 repeat
    pfam05735
    Location:545 → 742
    TSP_C; Thrombospondin C-terminal region
    cd16077
    Location:30 → 72
    TSP-5cc; Coiled coil region of thrombospondin-5 (TSP-5)
Nucleotide Protein
Heading Accession and Version

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