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TFAP4 transcription factor AP-4 [ Mustela putorius furo (domestic ferret) ]

Gene ID: 101677565, updated on 8-Mar-2024

Summary

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Gene symbol
TFAP4
Gene description
transcription factor AP-4
See related
Ensembl:ENSMPUG00000015023
Gene type
protein coding
RefSeq status
MODEL
Organism
Mustela putorius furo (sub-species: furo)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Mustelinae; Mustela
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
102 current ASM1176430v1.1 (GCF_011764305.1) Unplaced Scaffold NW_025422145.1 (12180527..12215023)
101 previous assembly MusPutFur1.0 (GCF_000215625.1) Unplaced Scaffold NW_004569169.1 (12205345..12240126)

NW_025422145.1Genomic Context describing neighboring genes Neighboring gene mitochondrial import inner membrane translocase subunit TIM16 Neighboring gene vasorin Neighboring gene GLIS family zinc finger 2 Neighboring gene sarcalumenin Neighboring gene U1 spliceosomal RNA Neighboring gene adenylate cyclase 9

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequencing, annotation, and characterization of the influenza ferret infectome. León AJ, et al. J Virol, 2013 Feb. PMID 23236062, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcription factor AP-4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mustela putorius furo Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1176430v1.1 Primary Assembly

Genomic

  1. NW_025422145.1 Reference ASM1176430v1.1 Primary Assembly

    Range
    12180527..12215023
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_045072004.1 → XP_044927939.1  transcription factor AP-4 isoform X4

    UniProtKB/TrEMBL
    A0A8U0UV11, G9KT16
    Conserved Domains (1) summary
    cd11419
    Location:21 → 81
    bHLHzip_TFAP4; basic Helix-Loop-Helix-zipper (bHLHzip) domain found in transcription factor AP-4 (TFAP4) and similar proteins

  2. XM_004750526.3 → XP_004750583.1  transcription factor AP-4 isoform X4

    See identical proteins and their annotated locations for XP_004750583.1

    UniProtKB/TrEMBL
    A0A8U0UV11, G9KT16
    Conserved Domains (1) summary
    cd11419
    Location:21 → 81
    bHLHzip_TFAP4; basic Helix-Loop-Helix-zipper (bHLHzip) domain found in transcription factor AP-4 (TFAP4) and similar proteins

  3. XM_004750532.3 → XP_004750589.1  transcription factor AP-4 isoform X5

    See identical proteins and their annotated locations for XP_004750589.1

    UniProtKB/TrEMBL
    A0A8U0RNV9, G9KT16
    Conserved Domains (1) summary
    cd11419
    Location:1 → 46
    bHLHzip_TFAP4; basic Helix-Loop-Helix-zipper (bHLHzip) domain found in transcription factor AP-4 (TFAP4) and similar proteins

  4. XM_004750522.3 → XP_004750579.1  transcription factor AP-4 isoform X4

    See identical proteins and their annotated locations for XP_004750579.1

    UniProtKB/TrEMBL
    A0A8U0UV11, G9KT16
    Conserved Domains (1) summary
    cd11419
    Location:21 → 81
    bHLHzip_TFAP4; basic Helix-Loop-Helix-zipper (bHLHzip) domain found in transcription factor AP-4 (TFAP4) and similar proteins

  5. XM_004750523.3 → XP_004750580.1  transcription factor AP-4 isoform X4

    See identical proteins and their annotated locations for XP_004750580.1

    UniProtKB/TrEMBL
    A0A8U0UV11, G9KT16
    Related
    ENSMPUP00000014912.1
    Conserved Domains (1) summary
    cd11419
    Location:21 → 81
    bHLHzip_TFAP4; basic Helix-Loop-Helix-zipper (bHLHzip) domain found in transcription factor AP-4 (TFAP4) and similar proteins

  6. XM_045072006.1 → XP_044927941.1  transcription factor AP-4 isoform X5

    UniProtKB/TrEMBL
    A0A8U0RNV9, G9KT16
    Conserved Domains (1) summary
    cd11419
    Location:1 → 46
    bHLHzip_TFAP4; basic Helix-Loop-Helix-zipper (bHLHzip) domain found in transcription factor AP-4 (TFAP4) and similar proteins

  7. XM_045072005.1 → XP_044927940.1  transcription factor AP-4 isoform X5

    UniProtKB/TrEMBL
    A0A8U0RNV9, G9KT16
    Conserved Domains (1) summary
    cd11419
    Location:1 → 46
    bHLHzip_TFAP4; basic Helix-Loop-Helix-zipper (bHLHzip) domain found in transcription factor AP-4 (TFAP4) and similar proteins

  8. XM_004750519.3 → XP_004750576.1  transcription factor AP-4 isoform X2

    UniProtKB/TrEMBL
    A0A8U0MQ93, M3YUA2
    Conserved Domains (1) summary
    cd11419
    Location:61 → 121
    bHLHzip_TFAP4; basic Helix-Loop-Helix-zipper (bHLHzip) domain found in transcription factor AP-4 (TFAP4) and similar proteins

  9. XM_045072003.1 → XP_044927938.1  transcription factor AP-4 isoform X1

    UniProtKB/TrEMBL
    A0A8U0RN64
    Conserved Domains (2) summary
    PTZ00121
    Location:123 → 307
    PTZ00121; MAEBL; Provisional
    cd11419
    Location:130 → 190
    bHLHzip_TFAP4; basic Helix-Loop-Helix-zipper (bHLHzip) domain found in transcription factor AP-4 (TFAP4) and similar proteins

  10. XM_004750520.3 → XP_004750577.1  transcription factor AP-4 isoform X3

    UniProtKB/TrEMBL
    A0A8U0SUP1, G9KT16
    Conserved Domains (1) summary
    cd11419
    Location:46 → 106
    bHLHzip_TFAP4; basic Helix-Loop-Helix-zipper (bHLHzip) domain found in transcription factor AP-4 (TFAP4) and similar proteins

  11. XM_004750528.3 → XP_004750585.1  transcription factor AP-4 isoform X5

    See identical proteins and their annotated locations for XP_004750585.1

    UniProtKB/TrEMBL
    A0A8U0RNV9, G9KT16
    Conserved Domains (1) summary
    cd11419
    Location:1 → 46
    bHLHzip_TFAP4; basic Helix-Loop-Helix-zipper (bHLHzip) domain found in transcription factor AP-4 (TFAP4) and similar proteins
Nucleotide Protein
Heading Accession and Version

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