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ATXN1 ataxin 1 [ Mustela putorius furo (domestic ferret) ]

Gene ID: 101675346, updated on 8-Mar-2024

Summary

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Gene symbol
ATXN1
Gene description
ataxin 1
See related
Ensembl:ENSMPUG00000005398
Gene type
protein coding
RefSeq status
MODEL
Organism
Mustela putorius furo (sub-species: furo)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Mustelinae; Mustela
Orthologs
human mouse all
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Genomic context

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See ATXN1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
102 current ASM1176430v1.1 (GCF_011764305.1) Unplaced Scaffold NW_025421490.1 (946544..1348484, complement)
101 previous assembly MusPutFur1.0 (GCF_000215625.1) Unplaced Scaffold NW_004569220.1 (7153427..7542292)

NW_025421490.1Genomic Context describing neighboring genes Neighboring gene myosin regulatory light chain interacting protein Neighboring gene small nucleolar RNA SNORA40 Neighboring gene guanosine monophosphate reductase Neighboring gene peptidyl-prolyl cis-trans isomerase A-like Neighboring gene uncharacterized LOC106006662 Neighboring gene uncharacterized LOC101674348

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nervous system development IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ataxin-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mustela putorius furo Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1176430v1.1 Primary Assembly

Genomic

  1. NW_025421490.1 Reference ASM1176430v1.1 Primary Assembly

    Range
    946544..1348484 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_045085051.1 → XP_044940986.1  ataxin-1

    UniProtKB/TrEMBL
    M3Y208
    Conserved Domains (3) summary
    PHA03247
    Location:13 → 265
    PHA03247; large tegument protein UL36; Provisional
    pfam08517
    Location:568 → 679
    AXH; Ataxin-1 and HBP1 module (AXH)
    pfam12547
    Location:393 → 439
    ATXN-1_C; Capicua transcriptional repressor modulator

  2. XM_045085052.1 → XP_044940987.1  ataxin-1

    UniProtKB/TrEMBL
    M3Y208
    Conserved Domains (3) summary
    PHA03247
    Location:13 → 265
    PHA03247; large tegument protein UL36; Provisional
    pfam08517
    Location:568 → 679
    AXH; Ataxin-1 and HBP1 module (AXH)
    pfam12547
    Location:393 → 439
    ATXN-1_C; Capicua transcriptional repressor modulator

  3. XM_045085054.1 → XP_044940989.1  ataxin-1

    UniProtKB/TrEMBL
    M3Y208
    Conserved Domains (3) summary
    PHA03247
    Location:13 → 265
    PHA03247; large tegument protein UL36; Provisional
    pfam08517
    Location:568 → 679
    AXH; Ataxin-1 and HBP1 module (AXH)
    pfam12547
    Location:393 → 439
    ATXN-1_C; Capicua transcriptional repressor modulator

  4. XM_045085053.1 → XP_044940988.1  ataxin-1

    UniProtKB/TrEMBL
    M3Y208
    Conserved Domains (3) summary
    PHA03247
    Location:13 → 265
    PHA03247; large tegument protein UL36; Provisional
    pfam08517
    Location:568 → 679
    AXH; Ataxin-1 and HBP1 module (AXH)
    pfam12547
    Location:393 → 439
    ATXN-1_C; Capicua transcriptional repressor modulator

  5. XM_045085057.1 → XP_044940992.1  ataxin-1

    UniProtKB/TrEMBL
    M3Y208
    Conserved Domains (3) summary
    PHA03247
    Location:13 → 265
    PHA03247; large tegument protein UL36; Provisional
    pfam08517
    Location:568 → 679
    AXH; Ataxin-1 and HBP1 module (AXH)
    pfam12547
    Location:393 → 439
    ATXN-1_C; Capicua transcriptional repressor modulator

  6. XM_045085056.1 → XP_044940991.1  ataxin-1

    UniProtKB/TrEMBL
    M3Y208
    Conserved Domains (3) summary
    PHA03247
    Location:13 → 265
    PHA03247; large tegument protein UL36; Provisional
    pfam08517
    Location:568 → 679
    AXH; Ataxin-1 and HBP1 module (AXH)
    pfam12547
    Location:393 → 439
    ATXN-1_C; Capicua transcriptional repressor modulator

  7. XM_045085055.1 → XP_044940990.1  ataxin-1

    UniProtKB/TrEMBL
    M3Y208
    Conserved Domains (3) summary
    PHA03247
    Location:13 → 265
    PHA03247; large tegument protein UL36; Provisional
    pfam08517
    Location:568 → 679
    AXH; Ataxin-1 and HBP1 module (AXH)
    pfam12547
    Location:393 → 439
    ATXN-1_C; Capicua transcriptional repressor modulator
Nucleotide Protein
Heading Accession and Version

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