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SON SON DNA and RNA binding protein [ Mustela putorius furo (domestic ferret) ]

Gene ID: 101675218, updated on 8-Mar-2024

Summary

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Gene symbol
SON
Gene description
SON DNA and RNA binding protein
See related
Ensembl:ENSMPUG00000001290
Gene type
protein coding
RefSeq status
MODEL
Organism
Mustela putorius furo (sub-species: furo)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Mustelinae; Mustela
Orthologs
human mouse all
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Genomic context

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See SON in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
102 current ASM1176430v1.1 (GCF_011764305.1) Unplaced Scaffold NW_025421491.1 (60831..94009, complement)
101 previous assembly MusPutFur1.0 (GCF_000215625.1) Unplaced Scaffold NW_004569199.1 (8942800..8974970)

NW_025421491.1Genomic Context describing neighboring genes Neighboring gene crystallin zeta like 1 Neighboring gene DNA replication fork stabilization factor DONSON Neighboring gene phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase Neighboring gene U2 spliceosomal RNA Neighboring gene DnaJ heat shock protein family (Hsp40) member C28

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptome sequencing and development of an expression microarray platform for the domestic ferret. Bruder CE, et al. BMC Genomics, 2010 Apr 19. PMID 20403183, Free PMC Article
  2. De-novo transcriptome sequencing of a normalized cDNA pool from influenza infected ferrets. Camp JV, et al. PLoS One, 2012. PMID 22606336, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of cell cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of mRNA splicing, via spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: protein SON
Names
SON DNA binding protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mustela putorius furo Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1176430v1.1 Primary Assembly

Genomic

  1. NW_025421491.1 Reference ASM1176430v1.1 Primary Assembly

    Range
    60831..94009 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_045085126.1 → XP_044941061.1  LOW QUALITY PROTEIN: protein SON

    UniProtKB/TrEMBL
    A0A8U0SDV0, M3XQC9
    Conserved Domains (7) summary
    smart00443
    Location:2309 → 2355
    G_patch; glycine rich nucleic binding domain
    PHA03247
    Location:317 → 692
    PHA03247; large tegument protein UL36; Provisional
    PRK10811
    Location:1196 → 1519
    rne; ribonuclease E; Reviewed
    TIGR03835
    Location:1407 → 1769
    termin_org_DnaJ; terminal organelle assembly protein TopJ
    pfam08430
    Location:1014 → 1139
    Forkhead_N; Forkhead N-terminal region
    NF000535
    Location:728 → 901
    MSCRAMM_SdrC; MSCRAMM family adhesin SdrC
    cd19870
    Location:2375 → 2449
    DSRM_SON-like; double-stranded RNA binding motif of protein SON and similar proteins
Nucleotide Protein
Heading Accession and Version

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