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UTP15 UTP15 small subunit processome component [ Mustela putorius furo (domestic ferret) ]

Gene ID: 101673731, updated on 8-Mar-2024

Summary

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Gene symbol
UTP15
Gene description
UTP15 small subunit processome component
See related
Ensembl:ENSMPUG00000005850
Gene type
protein coding
RefSeq status
MODEL
Organism
Mustela putorius furo (sub-species: furo)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Mustelinae; Mustela
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
102 current ASM1176430v1.1 (GCF_011764305.1) Unplaced Scaffold NW_025422471.1 (27670872..27687584, complement)
101 previous assembly MusPutFur1.0 (GCF_000215625.1) Unplaced Scaffold NW_004569266.1 (6026094..6044014, complement)

NW_025422471.1Genomic Context describing neighboring genes Neighboring gene ATP synthase subunit d, mitochondrial-like Neighboring gene Rho guanine nucleotide exchange factor 28 Neighboring gene 60S ribosomal protein L34-like Neighboring gene ankyrin repeat family A member 2 Neighboring gene basic transcription factor 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De-novo transcriptome sequencing of a normalized cDNA pool from influenza infected ferrets. Camp JV, et al. PLoS One, 2012. PMID 22606336, Free PMC Article
  2. Sequencing, annotation, and characterization of the influenza ferret infectome. León AJ, et al. J Virol, 2013 Feb. PMID 23236062, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of transcription by RNA polymerase I IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in rRNA processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
U3 small nucleolar RNA-associated protein 15 homolog
Names
UTP15, U3 small nucleolar ribonucleoprotein,-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mustela putorius furo Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1176430v1.1 Primary Assembly

Genomic

  1. NW_025422471.1 Reference ASM1176430v1.1 Primary Assembly

    Range
    27670872..27687584 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004766870.3 → XP_004766927.1  U3 small nucleolar RNA-associated protein 15 homolog

    See identical proteins and their annotated locations for XP_004766927.1

    UniProtKB/TrEMBL
    M3Y3A0
    Related
    ENSMPUP00000005801.1
    Conserved Domains (3) summary
    cd00200
    Location:39 → 306
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:41 → 79
    7WD40; WD40 repeat [structural motif]
    pfam09384
    Location:343 → 490
    UTP15_C; UTP15 C terminal

  2. XM_004766871.3 → XP_004766928.1  U3 small nucleolar RNA-associated protein 15 homolog

    See identical proteins and their annotated locations for XP_004766928.1

    UniProtKB/TrEMBL
    M3Y3A0
    Conserved Domains (3) summary
    cd00200
    Location:39 → 306
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:41 → 79
    7WD40; WD40 repeat [structural motif]
    pfam09384
    Location:343 → 490
    UTP15_C; UTP15 C terminal

  3. XM_045074408.1 → XP_044930343.1  U3 small nucleolar RNA-associated protein 15 homolog

    UniProtKB/TrEMBL
    M3Y3A0
    Conserved Domains (3) summary
    cd00200
    Location:39 → 306
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:41 → 79
    7WD40; WD40 repeat [structural motif]
    pfam09384
    Location:343 → 490
    UTP15_C; UTP15 C terminal
Nucleotide Protein
Heading Accession and Version

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