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HOXA1 homeobox A1 [ Mustela putorius furo (domestic ferret) ]

Gene ID: 101670468, updated on 8-Mar-2024

Summary

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Gene symbol
HOXA1
Gene description
homeobox A1
See related
Ensembl:ENSMPUG00000004711
Gene type
protein coding
RefSeq status
MODEL
Organism
Mustela putorius furo (sub-species: furo)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Mustelinae; Mustela
Orthologs
human mouse all
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Genomic context

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See HOXA1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
102 current ASM1176430v1.1 (GCF_011764305.1) Unplaced Scaffold NW_025421998.1 (58019000..58021824, complement)
101 previous assembly MusPutFur1.0 (GCF_000215625.1) Unplaced Scaffold NW_004569231.1 (1671723..1674462, complement)

NW_025421998.1Genomic Context describing neighboring genes Neighboring gene src kinase associated phosphoprotein 2 Neighboring gene uncharacterized LOC123387022 Neighboring gene uncharacterized LOC106006842 Neighboring gene uncharacterized LOC123387023 Neighboring gene homeobox A2 Neighboring gene homeobox A3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptome sequencing and development of an expression microarray platform for the domestic ferret. Bruder CE, et al. BMC Genomics, 2010 Apr 19. PMID 20403183, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
homeobox protein Hox-A1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mustela putorius furo Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1176430v1.1 Primary Assembly

Genomic

  1. NW_025421998.1 Reference ASM1176430v1.1 Primary Assembly

    Range
    58019000..58021824 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004762533.3 → XP_004762590.1  homeobox protein Hox-A1 isoform X1

    UniProtKB/TrEMBL
    M3Y023
    Related
    ENSMPUP00000004674.1
    Conserved Domains (2) summary
    COG5576
    Location:175 → 285
    COG5576; Homeodomain-containing transcription factor [Transcription]
    pfam00046
    Location:232 → 285
    Homeobox; Homeobox domain

  2. XM_004762534.3 → XP_004762591.1  homeobox protein Hox-A1 isoform X2

    UniProtKB/TrEMBL
    A0A8U0N0W1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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