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SPAST spastin [ Echinops telfairi (small Madagascar hedgehog) ]

Gene ID: 101661959, updated on 8-Mar-2024

Summary

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Gene symbol
SPAST
Gene description
spastin
Gene type
protein coding
RefSeq status
MODEL
Organism
Echinops telfairi
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Tenrecidae; Tenrecinae; Echinops
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
103 current ASM31398v2 (GCF_000313985.2) Unplaced Scaffold NW_022103907.1 (5116837..5202205)
101 previous assembly EchTel2.0 (GCF_000313985.1) Unplaced Scaffold NW_004558750.1 (5116913..5201928)

NW_022103907.1Genomic Context describing neighboring genes Neighboring gene dpy-30 histone methyltransferase complex regulatory subunit Neighboring gene U6 spliceosomal RNA Neighboring gene keratin, type I cytoskeletal 18-like Neighboring gene U6 spliceosomal RNA Neighboring gene U6 spliceosomal RNA Neighboring gene solute carrier family 30 member 6 Neighboring gene small EDRK-rich factor 1-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in microtubule cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
spastin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Echinops telfairi Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM31398v2 Primary Assembly

Genomic

  1. NW_022103907.1 Reference ASM31398v2 Primary Assembly

    Range
    5116837..5202205
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_045287022.1 → XP_045142957.1  spastin

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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