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RPL13A ribosomal protein L13a [ Echinops telfairi (small Madagascar hedgehog) ]

Gene ID: 101650566, updated on 8-Mar-2024

Summary

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Gene symbol
RPL13A
Gene description
ribosomal protein L13a
Gene type
protein coding
RefSeq status
MODEL
Organism
Echinops telfairi
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Tenrecidae; Tenrecinae; Echinops
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
103 current ASM31398v2 (GCF_000313985.2) Unplaced Scaffold NW_022104553.1 (21833101..21836697, complement)
101 previous assembly EchTel2.0 (GCF_000313985.1) Unplaced Scaffold NW_004558746.1 (14773164..14776728)

NW_022104553.1Genomic Context describing neighboring genes Neighboring gene reticulocalbin 3 Neighboring gene Fc gamma receptor and transporter Neighboring gene uncharacterized LOC123521923 Neighboring gene small nucleolar RNA SNORD35 Neighboring gene small nucleolar RNA SNORD35 Neighboring gene small nucleolar RNA SNORD34 Neighboring gene small nucleolar RNA Z195/SNORD33/SNORD32 family Neighboring gene small nucleolar RNA Z195/SNORD33/SNORD32 family Neighboring gene fms related receptor tyrosine kinase 3 ligand Neighboring gene aldehyde dehydrogenase 16 family member A1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of cytosolic large ribosomal subunit IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
60S ribosomal protein L13a

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Echinops telfairi Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM31398v2 Primary Assembly

Genomic

  1. NW_022104553.1 Reference ASM31398v2 Primary Assembly

    Range
    21833101..21836697 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004710436.3 → XP_004710493.1  60S ribosomal protein L13a

    Conserved Domains (1) summary
    PTZ00068
    Location:6 → 200
    PTZ00068; 60S ribosomal protein L13a; Provisional
Nucleotide Protein
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