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BEND5 BEN domain containing 5 [ Echinops telfairi (small Madagascar hedgehog) ]

Gene ID: 101650507, updated on 8-Mar-2024

Summary

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Gene symbol
BEND5
Gene description
BEN domain containing 5
Gene type
protein coding
RefSeq status
MODEL
Organism
Echinops telfairi
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Tenrecidae; Tenrecinae; Echinops
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
103 current ASM31398v2 (GCF_000313985.2) Unplaced Scaffold NW_022104341.1 (79228408..79285997)
101 previous assembly EchTel2.0 (GCF_000313985.1) Unplaced Scaffold NW_004558706.1 (79219560..79277201)

NW_022104341.1Genomic Context describing neighboring genes Neighboring gene AGBL carboxypeptidase 4 Neighboring gene U1 spliceosomal RNA Neighboring gene ATP synthase F(0) complex subunit C1, mitochondrial-like Neighboring gene U6 spliceosomal RNA Neighboring gene spermatogenesis associated 6

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
BEN domain-containing protein 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Echinops telfairi Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM31398v2 Primary Assembly

Genomic

  1. NW_022104341.1 Reference ASM31398v2 Primary Assembly

    Range
    79228408..79285997
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004699445.4 → XP_004699502.1  BEN domain-containing protein 5 isoform X1

    Conserved Domains (2) summary
    smart01025
    Location:321 → 413
    BEN; The BEN domain is found in diverse animal proteins
    cl00459
    Location:128 → 241
    MIT_CorA-like; metal ion transporter CorA-like divalent cation transporter superfamily

  2. XM_013003865.2 → XP_012859319.1  BEN domain-containing protein 5 isoform X2

    Conserved Domains (2) summary
    smart01025
    Location:153 → 245
    BEN; The BEN domain is found in diverse animal proteins
    PRK10869
    Location:8 → 62
    PRK10869; recombination and repair protein; Provisional
Nucleotide Protein
Heading Accession and Version

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