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S100A9 S100 calcium binding protein A9 [ Echinops telfairi (small Madagascar hedgehog) ]

Gene ID: 101649583, updated on 8-Mar-2024

Summary

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Gene symbol
S100A9
Gene description
S100 calcium binding protein A9
Gene type
protein coding
RefSeq status
MODEL
Organism
Echinops telfairi
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Tenrecidae; Tenrecinae; Echinops
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
103 current ASM31398v2 (GCF_000313985.2) Unplaced Scaffold NW_022103944.1 (634312..636496)
101 previous assembly EchTel2.0 (GCF_000313985.1) Unplaced Scaffold NW_004558868.1 (634803..636383)

NW_022103944.1Genomic Context describing neighboring genes Neighboring gene peptidoglycan recognition protein 3 Neighboring gene peptidoglycan recognition protein 4 Neighboring gene S100 calcium binding protein A12 Neighboring gene EF-hand domain-containing protein D1-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in antimicrobial humoral immune response mediated by antimicrobial peptide IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in astrocyte development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in autocrine signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in chronic inflammatory response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endothelial cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in leukocyte migration involved in inflammatory response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in neutrophil aggregation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in neutrophil chemotaxis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in peptidyl-cysteine S-nitrosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of integrin biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in response to lipopolysaccharide IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular exosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein S100-A9

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Echinops telfairi Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM31398v2 Primary Assembly

Genomic

  1. NW_022103944.1 Reference ASM31398v2 Primary Assembly

    Range
    634312..636496
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004717709.2 → XP_004717766.1  protein S100-A9

    Conserved Domains (1) summary
    cd05030
    Location:6 → 94
    calgranulins; Calgranulins: S-100 domain found in proteins belonging to the Calgranulin subgroup of the S100 family of EF-hand calcium-modulated proteins, including S100A8, S100A9, and S100A12 . Note that the S-100 hierarchy, to which this Calgranulin group belongs, ...
Nucleotide Protein
Heading Accession and Version

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