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GCNT1 glucosaminyl (N-acetyl) transferase 1 [ Echinops telfairi (small Madagascar hedgehog) ]

Gene ID: 101646097, updated on 8-Mar-2024

Summary

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Gene symbol
GCNT1
Gene description
glucosaminyl (N-acetyl) transferase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Echinops telfairi
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Tenrecidae; Tenrecinae; Echinops
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
103 current ASM31398v2 (GCF_000313985.2) Unplaced Scaffold NW_022103919.1 (16605164..16649106)
101 previous assembly EchTel2.0 (GCF_000313985.1) Unplaced Scaffold NW_004558779.1 (7085004..7086299)

NW_022103919.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC123521510 Neighboring gene riboflavin kinase Neighboring gene U2 spliceosomal RNA Neighboring gene prune homolog 2 with BCH domain

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase
Names
glucosaminyl (N-acetyl) transferase 1, core 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Echinops telfairi Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM31398v2 Primary Assembly

Genomic

  1. NW_022103919.1 Reference ASM31398v2 Primary Assembly

    Range
    16605164..16649106
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_045288571.1 → XP_045144506.1  beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase

    Conserved Domains (1) summary
    pfam02485
    Location:122 → 390
    Branch; Core-2/I-Branching enzyme

  2. XM_004713838.2 → XP_004713895.1  beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase

    Conserved Domains (1) summary
    pfam02485
    Location:122 → 390
    Branch; Core-2/I-Branching enzyme

  3. XM_045288570.1 → XP_045144505.1  beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase

    Conserved Domains (1) summary
    pfam02485
    Location:122 → 390
    Branch; Core-2/I-Branching enzyme
Nucleotide Protein
Heading Accession and Version

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