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PDZD8 PDZ domain containing 8 [ Condylura cristata (star-nosed mole) ]

Gene ID: 101627548, updated on 11-Apr-2024

Summary

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Gene symbol
PDZD8
Gene description
PDZ domain containing 8
Gene type
protein coding
RefSeq status
MODEL
Organism
Condylura cristata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Eulipotyphla; Talpidae; Condylura
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
101 current ConCri1.0 (GCF_000260355.1) Unplaced Scaffold NW_004567112.1 (7184704..7244818)

NW_004567112.1Genomic Context describing neighboring genes Neighboring gene RAB11 family interacting protein 2 Neighboring gene empty spiracles homeobox 2 Neighboring gene solute carrier family 18 member A2 Neighboring gene potassium two pore domain channel subfamily K member 18

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004567112.1 Unplaced Scaffold Reference ConCri1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables lipid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitochondrial calcium ion homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitochondrion-endoplasmic reticulum membrane tethering IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondria-associated endoplasmic reticulum membrane contact site IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
PDZ domain-containing protein 8

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Condylura cristata Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ConCri1.0

Genomic

  1. NW_004567112.1 Reference ConCri1.0

    Range
    7184704..7244818
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012723842.1 → XP_012579296.1  PDZ domain-containing protein 8 isoform X1

    Conserved Domains (2) summary
    cd00029
    Location:848 → 890
    C1; Protein kinase C conserved region 1 (C1) . Cysteine-rich zinc binding domain. Some members of this domain family bind phorbol esters and diacylglycerol, some are reported to bind RasGTP. May occur in tandem arrangement. Diacylglycerol (DAG) is a second ...
    cd00992
    Location:372 → 449
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...

  2. XM_012723843.1 → XP_012579297.1  PDZ domain-containing protein 8 isoform X2

    Conserved Domains (1) summary
    cd00992
    Location:372 → 429
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...

  3. XM_012723845.1 → XP_012579299.1  PDZ domain-containing protein 8 isoform X3

    Conserved Domains (1) summary
    pfam10296
    Location:106 → 213
    DUF2404; Putative integral membrane protein conserved region (DUF2404)
Nucleotide Protein
Heading Accession and Version

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