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LOC101621621 zinc finger protein 154-like [ Condylura cristata (star-nosed mole) ]

Gene ID: 101621621, updated on 22-Oct-2023

Summary

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Gene symbol
LOC101621621
Gene description
zinc finger protein 154-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Condylura cristata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Eulipotyphla; Talpidae; Condylura
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Genomic context

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Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
101 current ConCri1.0 (GCF_000260355.1) Unplaced Scaffold NW_004567167.1 (422951..435913, complement)

NW_004567167.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 260-like Neighboring gene zinc finger protein 211 Neighboring gene zinc finger protein 835 Neighboring gene zinc finger protein 154-like Neighboring gene uncharacterized LOC105854605

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004567167.1 Unplaced Scaffold Reference ConCri1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in negative regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cytokine production IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of immune system process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger protein 154-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Condylura cristata Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ConCri1.0

Genomic

  1. NW_004567167.1 Reference ConCri1.0

    Range
    422951..435913 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012734698.1 → XP_012590152.1  zinc finger protein 154-like isoform X4

    Conserved Domains (4) summary
    COG5048
    Location:175 → 462
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:328 → 348
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:214 → 236
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:256 → 280
    zf-H2C2_2; Zinc-finger double domain

  2. XM_012734695.1 → XP_012590149.1  zinc finger protein 154-like isoform X1

    Conserved Domains (6) summary
    smart00349
    Location:30 → 78
    KRAB; krueppel associated box
    COG5048
    Location:233 → 520
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:386 → 406
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:272 → 294
    zf-C2H2; Zinc finger, C2H2 type
    pfam01352
    Location:30 → 69
    KRAB; KRAB box
    pfam13465
    Location:314 → 338
    zf-H2C2_2; Zinc-finger double domain

  3. XM_012734696.1 → XP_012590150.1  zinc finger protein 154-like isoform X2

    Conserved Domains (6) summary
    smart00349
    Location:14 → 62
    KRAB; krueppel associated box
    COG5048
    Location:217 → 504
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:370 → 390
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:256 → 278
    zf-C2H2; Zinc finger, C2H2 type
    pfam01352
    Location:14 → 53
    KRAB; KRAB box
    pfam13465
    Location:298 → 322
    zf-H2C2_2; Zinc-finger double domain

  4. XM_012734697.1 → XP_012590151.1  zinc finger protein 154-like isoform X3

    Conserved Domains (6) summary
    smart00349
    Location:3 → 51
    KRAB; krueppel associated box
    COG5048
    Location:206 → 493
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:359 → 379
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:245 → 267
    zf-C2H2; Zinc finger, C2H2 type
    pfam01352
    Location:3 → 42
    KRAB; KRAB box
    pfam13465
    Location:287 → 311
    zf-H2C2_2; Zinc-finger double domain
Nucleotide Protein
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