U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SVEP1 sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1 [ Condylura cristata (star-nosed mole) ]

Gene ID: 101618736, updated on 8-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
SVEP1
Gene description
sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Condylura cristata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Eulipotyphla; Talpidae; Condylura
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: Un
Exon count:
48
Annotation release Status Assembly Chr Location
101 current ConCri1.0 (GCF_000260355.1) Unplaced Scaffold NW_004567107.1 (16995864..17142358)

NW_004567107.1Genomic Context describing neighboring genes Neighboring gene lysophosphatidic acid receptor 1 Neighboring gene muscle associated receptor tyrosine kinase Neighboring gene thioredoxin domain containing 8 Neighboring gene thioredoxin

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_004567107.1 Unplaced Scaffold Reference ConCri1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Condylura cristata Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ConCri1.0

Genomic

  1. NW_004567107.1 Reference ConCri1.0

    Range
    16995864..17142358
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004677442.2 → XP_004677499.1  sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1

    Conserved Domains (11) summary
    cd00033
    Location:1789 → 1843
    CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system
    smart00032
    Location:2775 → 2828
    CCP; Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR)
    smart00179
    Location:1745 → 1783
    EGF_CA; Calcium-binding EGF-like domain
    PHA02927
    Location:2712 → 2944
    PHA02927; secreted complement-binding protein; Provisional
    cd00054
    Location:1231 → 1267
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    pfam00084
    Location:1628 → 1685
    Sushi; Sushi repeat (SCR repeat)
    pfam00092
    Location:85 → 259
    VWA; von Willebrand factor type A domain
    pfam02494
    Location:561 → 643
    HYR; HYR domain
    pfam07699
    Location:1113 → 1160
    GCC2_GCC3; GCC2 and GCC3
    cl03620
    Location:671 → 723
    DUF5011; Domain of unknown function (DUF5011)
    cl22861
    Location:1424 → 1622
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.