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Hpcal1 hippocalcin like 1 [ Jaculus jaculus (lesser Egyptian jerboa) ]

Gene ID: 101615474, updated on 8-Mar-2024

Summary

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Gene symbol
Hpcal1
Gene description
hippocalcin like 1
See related
EnsemblRapid:ENSJJAG00000013350
Gene type
protein coding
RefSeq status
MODEL
Organism
Jaculus jaculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Dipodoidea; Dipodidae; Dipodinae; Jaculus
Orthologs
human all
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Genomic context

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Location:
chromosome: 5
Exon count:
5
Annotation release Status Assembly Chr Location
102 current mJacJac1.mat.Y.cur (GCF_020740685.1) 5 NC_059106.1 (125970528..126094366, complement)
101 previous assembly JacJac1.0 (GCF_000280705.1) Unplaced Scaffold NW_004504395.1 (6985285..6992147, complement)

Chromosome 5 - NC_059106.1Genomic Context describing neighboring genes Neighboring gene myotubularin-related protein 11-like Neighboring gene U6 spliceosomal RNA Neighboring gene small nucleolar RNA SNORA42/SNORA80 family Neighboring gene 40S ribosomal protein S27-like Neighboring gene ornithine decarboxylase 1 Neighboring gene U6 spliceosomal RNA Neighboring gene ribonucleotide reductase regulatory subunit M2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hippocalcin-like protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Jaculus jaculus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mJacJac1.mat.Y.cur Primary Assembly

Genomic

  1. NC_059106.1 Reference mJacJac1.mat.Y.cur Primary Assembly

    Range
    125970528..126094366 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004665696.2 → XP_004665753.1  hippocalcin-like protein 1

    See identical proteins and their annotated locations for XP_004665753.1

    UniProtKB/TrEMBL
    A0A8C5KJ59
    Conserved Domains (1) summary
    COG5126
    Location:13 → 179
    FRQ1; Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms]

  2. XM_045150820.1 → XP_045006755.1  hippocalcin-like protein 1

    UniProtKB/TrEMBL
    A0A8C5KJ59
    Related
    ENSJJAP00000027173.1, ENSJJAT00000039984.1
    Conserved Domains (1) summary
    COG5126
    Location:13 → 179
    FRQ1; Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms]
Nucleotide Protein
Heading Accession and Version

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