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Nr2c1 nuclear receptor subfamily 2 group C member 1 [ Jaculus jaculus (lesser Egyptian jerboa) ]

Gene ID: 101612610, updated on 8-Mar-2024

Summary

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Gene symbol
Nr2c1
Gene description
nuclear receptor subfamily 2 group C member 1
See related
EnsemblRapid:ENSJJAG00000017174
Gene type
protein coding
RefSeq status
MODEL
Organism
Jaculus jaculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Dipodoidea; Dipodidae; Dipodinae; Jaculus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 6
Exon count:
18
Annotation release Status Assembly Chr Location
102 current mJacJac1.mat.Y.cur (GCF_020740685.1) 6 NC_059107.1 (138312796..138371399, complement)
101 previous assembly JacJac1.0 (GCF_000280705.1) Unplaced Scaffold NW_004504314.1 (46459433..46506824, complement)

Chromosome 6 - NC_059107.1Genomic Context describing neighboring genes Neighboring gene translationally-controlled tumor protein-like Neighboring gene NADH:ubiquinone oxidoreductase subunit A12 Neighboring gene FYVE, RhoGEF and PH domain containing 6 Neighboring gene uncharacterized LOC123461454 Neighboring gene vezatin, adherens junctions transmembrane protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nuclear receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in anatomical structure development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
nuclear receptor subfamily 2 group C member 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Jaculus jaculus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mJacJac1.mat.Y.cur Primary Assembly

Genomic

  1. NC_059107.1 Reference mJacJac1.mat.Y.cur Primary Assembly

    Range
    138312796..138371399 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_045152658.1 → XP_045008593.1  nuclear receptor subfamily 2 group C member 1 isoform X1

    Conserved Domains (2) summary
    cd06952
    Location:368 → 589
    NR_LBD_TR2_like; The ligand binding domain of the orphan nuclear receptors TR4 and TR2
    cd06967
    Location:107 → 193
    NR_DBD_TR2_like; DNA-binding domain of the TR2 and TR4 (human testicular receptor 2 and 4) is composed of two C4-type zinc fingers

  2. XM_045152656.1 → XP_045008591.1  nuclear receptor subfamily 2 group C member 1 isoform X1

    Related
    ENSJJAP00000014843.2, ENSJJAT00000021346.2
    Conserved Domains (2) summary
    cd06952
    Location:368 → 589
    NR_LBD_TR2_like; The ligand binding domain of the orphan nuclear receptors TR4 and TR2
    cd06967
    Location:107 → 193
    NR_DBD_TR2_like; DNA-binding domain of the TR2 and TR4 (human testicular receptor 2 and 4) is composed of two C4-type zinc fingers

  3. XM_045152661.1 → XP_045008596.1  nuclear receptor subfamily 2 group C member 1 isoform X2

  4. XM_045152657.1 → XP_045008592.1  nuclear receptor subfamily 2 group C member 1 isoform X1

    Conserved Domains (2) summary
    cd06952
    Location:368 → 589
    NR_LBD_TR2_like; The ligand binding domain of the orphan nuclear receptors TR4 and TR2
    cd06967
    Location:107 → 193
    NR_DBD_TR2_like; DNA-binding domain of the TR2 and TR4 (human testicular receptor 2 and 4) is composed of two C4-type zinc fingers

  5. XM_045152655.1 → XP_045008590.1  nuclear receptor subfamily 2 group C member 1 isoform X1

    Conserved Domains (2) summary
    cd06952
    Location:368 → 589
    NR_LBD_TR2_like; The ligand binding domain of the orphan nuclear receptors TR4 and TR2
    cd06967
    Location:107 → 193
    NR_DBD_TR2_like; DNA-binding domain of the TR2 and TR4 (human testicular receptor 2 and 4) is composed of two C4-type zinc fingers

  6. XM_045152654.1 → XP_045008589.1  nuclear receptor subfamily 2 group C member 1 isoform X1

    Conserved Domains (2) summary
    cd06952
    Location:368 → 589
    NR_LBD_TR2_like; The ligand binding domain of the orphan nuclear receptors TR4 and TR2
    cd06967
    Location:107 → 193
    NR_DBD_TR2_like; DNA-binding domain of the TR2 and TR4 (human testicular receptor 2 and 4) is composed of two C4-type zinc fingers

  7. XM_045152653.1 → XP_045008588.1  nuclear receptor subfamily 2 group C member 1 isoform X1

    Conserved Domains (2) summary
    cd06952
    Location:368 → 589
    NR_LBD_TR2_like; The ligand binding domain of the orphan nuclear receptors TR4 and TR2
    cd06967
    Location:107 → 193
    NR_DBD_TR2_like; DNA-binding domain of the TR2 and TR4 (human testicular receptor 2 and 4) is composed of two C4-type zinc fingers

  8. XM_045152659.1 → XP_045008594.1  nuclear receptor subfamily 2 group C member 1 isoform X1

    Conserved Domains (2) summary
    cd06952
    Location:368 → 589
    NR_LBD_TR2_like; The ligand binding domain of the orphan nuclear receptors TR4 and TR2
    cd06967
    Location:107 → 193
    NR_DBD_TR2_like; DNA-binding domain of the TR2 and TR4 (human testicular receptor 2 and 4) is composed of two C4-type zinc fingers

  9. XM_045152660.1 → XP_045008595.1  nuclear receptor subfamily 2 group C member 1 isoform X1

    Conserved Domains (2) summary
    cd06952
    Location:368 → 589
    NR_LBD_TR2_like; The ligand binding domain of the orphan nuclear receptors TR4 and TR2
    cd06967
    Location:107 → 193
    NR_DBD_TR2_like; DNA-binding domain of the TR2 and TR4 (human testicular receptor 2 and 4) is composed of two C4-type zinc fingers

  10. XM_045152662.1 → XP_045008597.1  nuclear receptor subfamily 2 group C member 1 isoform X3

Nucleotide Protein
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