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Mecp2 methyl-CpG binding protein 2 [ Jaculus jaculus (lesser Egyptian jerboa) ]

Gene ID: 101612547, updated on 8-Mar-2024

Summary

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Gene symbol
Mecp2
Gene description
methyl-CpG binding protein 2
See related
EnsemblRapid:ENSJJAG00000022463
Gene type
protein coding
RefSeq status
MODEL
Organism
Jaculus jaculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Dipodoidea; Dipodidae; Dipodinae; Jaculus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: X
Exon count:
3
Annotation release Status Assembly Chr Location
102 current mJacJac1.mat.Y.cur (GCF_020740685.1) X NC_059125.1 (152025150..152132805, complement)
101 previous assembly JacJac1.0 (GCF_000280705.1) Unplaced Scaffold NW_004504496.1 (1223525..1322735, complement)

Chromosome X - NC_059125.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene interleukin 1 receptor associated kinase 1 Neighboring gene U2 spliceosomal RNA Neighboring gene 28S ribosomal protein S17, mitochondrial-like Neighboring gene medium-wave-sensitive opsin 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chromatin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables double-stranded methylated DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables methyl-CpG binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of heterochromatin IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
methyl-CpG-binding protein 2
Names
methyl CpG binding protein 2 (Rett syndrome)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Jaculus jaculus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mJacJac1.mat.Y.cur Primary Assembly

Genomic

  1. NC_059125.1 Reference mJacJac1.mat.Y.cur Primary Assembly

    Range
    152025150..152132805 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004672098.3 → XP_004672155.1  methyl-CpG-binding protein 2

    UniProtKB/TrEMBL
    A0A8C5LDB3, A0A8C5LFD9
    Related
    ENSJJAP00000022396.1, ENSJJAT00000028961.2
    Conserved Domains (2) summary
    smart00391
    Location:104 → 181
    MBD; Methyl-CpG binding domain
    cl01461
    Location:166 → 204
    DUF2239; Uncharacterized protein conserved in bacteria (DUF2239)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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