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C1qtnf1 C1q and TNF related 1 [ Jaculus jaculus (lesser Egyptian jerboa) ]

Gene ID: 101605878, updated on 8-Mar-2024

Summary

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Gene symbol
C1qtnf1
Gene description
C1q and TNF related 1
See related
EnsemblRapid:ENSJJAG00000037348
Gene type
protein coding
RefSeq status
MODEL
Organism
Jaculus jaculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Dipodoidea; Dipodidae; Dipodinae; Jaculus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 9
Exon count:
4
Annotation release Status Assembly Chr Location
102 current mJacJac1.mat.Y.cur (GCF_020740685.1) 9 NC_059110.1 (120196530..120220151, complement)
101 previous assembly JacJac1.0 (GCF_000280705.1) Unplaced Scaffold NW_004504328.1 (19061858..19066919)

Chromosome 9 - NC_059110.1Genomic Context describing neighboring genes Neighboring gene RNA binding fox-1 homolog 3 Neighboring gene endo-beta-N-acetylglucosaminidase Neighboring gene galectin 3 binding protein Neighboring gene calcium activated nucleotidase 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
complement C1q tumor necrosis factor-related protein 1
Names
C1q and tumor necrosis factor related protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Jaculus jaculus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mJacJac1.mat.Y.cur Primary Assembly

Genomic

  1. NC_059110.1 Reference mJacJac1.mat.Y.cur Primary Assembly

    Range
    120196530..120220151 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_045159470.1 → XP_045015405.1  complement C1q tumor necrosis factor-related protein 1

    UniProtKB/TrEMBL
    A0A8C5NZY7
    Related
    ENSJJAP00000030124.1, ENSJJAT00000041165.1
    Conserved Domains (2) summary
    pfam00386
    Location:147 → 275
    C1q; C1q domain
    pfam01391
    Location:98 → 138
    Collagen; Collagen triple helix repeat (20 copies)

  2. XM_004655244.3 → XP_004655301.1  complement C1q tumor necrosis factor-related protein 1

    UniProtKB/TrEMBL
    A0A8C5NZY7
    Conserved Domains (2) summary
    pfam00386
    Location:147 → 275
    C1q; C1q domain
    pfam01391
    Location:98 → 138
    Collagen; Collagen triple helix repeat (20 copies)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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