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Rffl ring finger and FYVE like domain containing E3 ubiquitin protein ligase [ Jaculus jaculus (lesser Egyptian jerboa) ]

Gene ID: 101600666, updated on 3-Apr-2024

Summary

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Gene symbol
Rffl
Gene description
ring finger and FYVE like domain containing E3 ubiquitin protein ligase
See related
EnsemblRapid:ENSJJAG00000020929
Gene type
protein coding
RefSeq status
MODEL
Organism
Jaculus jaculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Dipodoidea; Dipodidae; Dipodinae; Jaculus
Orthologs
human mouse all
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Genomic context

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See Rffl in Genome Data Viewer
Location:
chromosome: 9
Exon count:
8
Annotation release Status Assembly Chr Location
102 current mJacJac1.mat.Y.cur (GCF_020740685.1) 9 NC_059110.1 (92667671..92754827, complement)
101 previous assembly JacJac1.0 (GCF_000280705.1) Unplaced Scaffold NW_004504384.1 (5971062..6034158)

Chromosome 9 - NC_059110.1Genomic Context describing neighboring genes Neighboring gene chaperonin containing TCP1 subunit 6B Neighboring gene zinc finger protein 830 Neighboring gene DNA ligase 3 Neighboring gene uncharacterized LOC123463591 Neighboring gene RAD51 paralog D Neighboring gene fibronectin type III domain containing 8

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin protein ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of cysteine-type endopeptidase activity involved in execution phase of apoptosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of extrinsic apoptotic signaling pathway via death domain receptors IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteasome-mediated ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein K48-linked ubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
E3 ubiquitin-protein ligase rififylin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Jaculus jaculus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mJacJac1.mat.Y.cur Primary Assembly

Genomic

  1. NC_059110.1 Reference mJacJac1.mat.Y.cur Primary Assembly

    Range
    92667671..92754827 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_045159660.1 → XP_045015595.1  E3 ubiquitin-protein ligase rififylin isoform X1

    UniProtKB/TrEMBL
    A0A8C5L7X6
    Related
    ENSJJAP00000020200.2, ENSJJAT00000026743.2
    Conserved Domains (3) summary
    PRK14971
    Location:117 → 245
    PRK14971; DNA polymerase III subunit gamma/tau
    cd16500
    Location:315 → 353
    RING-HC_CARP; RING finger, HC subclass, found in caspases-8 and -10-associated RING finger protein CARP-1, CARP-2 and similar proteins
    cl28890
    Location:44 → 92
    FYVE_like_SF; FYVE domain like superfamily

  2. XM_045159659.1 → XP_045015594.1  E3 ubiquitin-protein ligase rififylin isoform X3

    Related
    ENSJJAP00000036243.1, ENSJJAT00000035506.1

  3. XM_045159658.1 → XP_045015593.1  E3 ubiquitin-protein ligase rififylin isoform X2

    UniProtKB/TrEMBL
    A0A8C5P3V6
    Related
    ENSJJAP00000020201.2, ENSJJAT00000026744.2
    Conserved Domains (3) summary
    PRK14971
    Location:117 → 199
    PRK14971; DNA polymerase III subunit gamma/tau
    cd16500
    Location:287 → 325
    RING-HC_CARP; RING finger, HC subclass, found in caspases-8 and -10-associated RING finger protein CARP-1, CARP-2 and similar proteins
    cl28890
    Location:44 → 92
    FYVE_like_SF; FYVE domain like superfamily

  4. XM_045159657.1 → XP_045015592.1  E3 ubiquitin-protein ligase rififylin isoform X1

    UniProtKB/TrEMBL
    A0A8C5L7X6
    Conserved Domains (3) summary
    PRK14971
    Location:117 → 245
    PRK14971; DNA polymerase III subunit gamma/tau
    cd16500
    Location:315 → 353
    RING-HC_CARP; RING finger, HC subclass, found in caspases-8 and -10-associated RING finger protein CARP-1, CARP-2 and similar proteins
    cl28890
    Location:44 → 92
    FYVE_like_SF; FYVE domain like superfamily
Nucleotide Protein
Heading Accession and Version

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